RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 KLRC2P26717 231 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 ADORA2AP29274 412 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 GTF2A2P52657 109 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 COPS2P61201 443 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 LMNB2Q03252 620 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 TMEM130Q8N3G9 435 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 PPTC7Q8NI37 304 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 PPP1R16BQ96T49 567 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 SELENOSQ9BQE4 189 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 RASSF4Q9H2L5 321 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 DDX56Q9NY93 547 aaKnown RBP14.69□□□□□ -0.06
MSH2-206ENST00000543555 CYTH4Q9UIA0 394 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 AKT3Q9Y243 479 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 TTC4O95801 387 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 CETPP11597 493 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 PTPN7P35236 360 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 MAGEA9P43362 315 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 CCNA1P78396 465 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 IZUMO3Q5VZ72 239 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 DRICH1Q6PGQ1 229 aaPredicted RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 GSTA5Q7RTV2 222 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 CXorf38Q8TB03 319 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 AFG1LQ8WV93 481 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 XPO6Q96QU8 1125 aaKnown RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 SMYD3Q9H7B4 428 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 DNAJC17Q9NVM6 304 aaKnown RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 MGAMO43451 1857 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 GOLGA8SH3BPF8 625 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 CHN1P15882 459 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 ERMARDQ5T6L9 678 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 MICALCLQ6ZW33 695 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 CPB2Q96IY4 423 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 DNPEPQ9ULA0 475 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 COL1A2P08123 1366 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 ZSWIM8A7E2V4 1837 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 hCG_1818297A0A087WSY0 165 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 RBM47A0AV96 593 aaKnown RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 SIGLEC16A6NMB1 481 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 VTNP04004 478 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 ZNF286BP0CG31 522 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 RFC1P35251 1148 aaPredicted RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 FKBP1BP68106 108 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 LONRF1Q17RB8 773 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 SLC4A11Q8NBS3 891 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 EMID1Q96A84 441 aaPredicted RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 ACSF2Q96CM8 615 aaPredicted RBP14.68□□□□□ -0.06
MSH2-206ENST00000543555 PWWP2AQ96N64 755 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 TWNKQ96RR1 684 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 ASB7Q9H672 318 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 TJP2Q9UDY2 1190 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 GGA2Q9UJY4 613 aa14.68□□□□□ -0.06
MSH2-206ENST00000543555 TMEM88BA6NKF7 163 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 KRT3P12035 628 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 ARF4P18085 180 aaPredicted RBP14.67□□□□□ -0.06
MSH2-206ENST00000543555 ATICP31939 592 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 PTPN11Q06124 597 aaPredicted RBP14.67□□□□□ -0.06
MSH2-206ENST00000543555 ORC1Q13415 861 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 KYNUQ16719 465 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 TFDP3Q5H9I0 405 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 POLNQ7Z5Q5 900 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 PRUNE1Q86TP1 453 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 SERPINB12Q96P63 405 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 VRTNQ9H8Y1 702 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 NINJ2Q9NZG7 142 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 LRRD1A4D1F6 860 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 CILPO75339 1184 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 PSMA2P25787 234 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 ADCYAP1R1P41586 468 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 CDKN2BP42772 138 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 PSMC1P62191 440 aaKnown RBP14.67□□□□□ -0.06
MSH2-206ENST00000543555 P3H1Q32P28 736 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 SLC10A6Q3KNW5 377 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 HIBCHQ6NVY1 386 aaPredicted RBP14.67□□□□□ -0.06
MSH2-206ENST00000543555 JOSD2Q8TAC2 188 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 CCHCR1Q8TD31 782 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
MSH2-206ENST00000543555 C16orf70Q9BSU1 422 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 ELOVL4Q9GZR5 314 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
MSH2-206ENST00000543555 HMGXB4Q9UGU5 601 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 ZNF148Q9UQR1 794 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 EVPLQ92817 2033 aa14.67□□□□□ -0.06
MSH2-206ENST00000543555 A0A087WUV0 522 aaPredicted RBP14.66□□□□□ -0.06
MSH2-206ENST00000543555 C5orf60A6NFR6 353 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 GSCP56915 257 aaPredicted RBP14.66□□□□□ -0.06
MSH2-206ENST00000543555 QPCTQ16769 361 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 TAOK1Q7L7X3 1001 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 FNIP1Q8TF40 1166 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 TMEM176AQ96HP8 235 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 CPXM1Q96SM3 734 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 KATNBL1Q9H079 304 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 CYP3A43Q9HB55 503 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 WDR35Q9P2L0 1181 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 SLC25A11Q02978 314 aaKnown RBP14.66□□□□□ -0.06
MSH2-206ENST00000543555 KYAT1Q16773 422 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 MTHFD1LQ6UB35 978 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 ALLCQ8N6M5 410 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 GLIS1Q8NBF1 620 aa14.66□□□□□ -0.06
MSH2-206ENST00000543555 IPO4Q8TEX9 1081 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms