RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
DDB1-221ENST00000543162 NAA35Q5VZE5 725 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 ARHGAP17Q68EM7 881 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 CCAR2Q8N163 923 aaKnown RBP11.33□□□□□ -0.6
DDB1-221ENST00000543162 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
DDB1-221ENST00000543162 TXLNBQ8N3L3 684 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
DDB1-221ENST00000543162 CYFIP2Q96F07 1278 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 LPIN3Q9BQK8 851 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 RTP3Q9BQQ7 232 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 ACBD6Q9BR61 282 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 TTPALQ9BTX7 342 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 UBE2OQ9C0C9 1292 aaKnown RBP11.33□□□□□ -0.6
DDB1-221ENST00000543162 TAS2R14Q9NYV8 317 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 HESX1Q9UBX0 185 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 NENFQ9UMX5 172 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDB1-221ENST00000543162 CEP290O15078 2479 aa11.33□□□□□ -0.6
DDB1-221ENST00000543162 ESPNB1AK53 854 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 H7C4K7 107 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 M0QYV0 167 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 CYP1A1P04798 512 aaPredicted RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 CCDC130P13994 396 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 VAV2P52735 878 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 NOMO3P69849 1222 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 CTXN3Q4LDR2 81 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 MDH1BQ5I0G3 518 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 INTS6LQ5JSJ4 861 aaKnown RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 ACAD10Q6JQN1 1059 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 PPP1R2P3Q6NXS1 205 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 ANKS3Q6ZW76 656 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 H2AFVQ71UI9 128 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 OR10T2Q8NGX3 314 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 CPA5Q8WXQ8 436 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 CLP1Q92989 425 aaKnown RBP11.32□□□□□ -0.6
DDB1-221ENST00000543162 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 MED10Q9BTT4 135 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 LHX5Q9H2C1 402 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 CRTAC1Q9NQ79 661 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 KCND1Q9NSA2 647 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
DDB1-221ENST00000543162 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 KIAA1671Q9BY89 1806 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 FAM170AA1A519 330 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 MYBPHLA2RUH7 354 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 LCHNA4D1U4 455 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 GOLGA6L9A6NEM1 432 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 OR6C75A6NL08 312 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 H0YGN5 161 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 EFEMP2O95967 443 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 UNGP13051 313 aaPredicted RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 ADORA2BP29275 332 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 RABGGTBP53611 331 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 GALCP54803 685 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 CENPCQ03188 943 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 KRT17Q04695 432 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 KIF5AQ12840 1032 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 ARHGAP29Q52LW3 1261 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 RTP2Q5QGT7 225 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 TAS1R1Q7RTX1 841 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 DCP1BQ8IZD4 617 aaKnown RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 C1orf131Q8NDD1 294 aaKnown RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 UBA3Q8TBC4 463 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 MYCBPAPQ8TBZ2 947 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 SLC2A14Q8TDB8 520 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 PPP1R13BQ96KQ4 1090 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 GDF15Q99988 308 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 HERC2P3Q9BVR0 1158 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 VN1R3Q9BXE9 311 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
DDB1-221ENST00000543162 TSGA10Q9BZW7 698 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 GTF3C4Q9UKN8 822 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 INTUQ9ULD6 942 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 ATP8B3O60423 1300 aa11.31□□□□□ -0.6
DDB1-221ENST00000543162 A0A0U1RQJ8 604 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 ANKRD62A6NC57 917 aa11.3□□□□□ -0.6
DDB1-221ENST00000543162 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms