RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 PLXDC1Q8IUK5 500 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 BEND2Q8NDZ0 799 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 GPR156Q8NFN8 814 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 CHAC2Q8WUX2 184 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 AUTS2Q8WXX7 1259 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 CABS1Q96KC9 395 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 RMDN2Q96LZ7 410 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 PLEKHF1Q96S99 279 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 WDR11Q9BZH6 1224 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 IQCGQ9H095 443 aaKnown RBP6.52□□□□□ -1.37
XRCC4-206ENST00000542685 SERHL2Q9H4I8 314 aa6.52□□□□□ -1.37
XRCC4-206ENST00000542685 USP15Q9Y4E8 981 aaPredicted RBP6.52□□□□□ -1.37
XRCC4-206ENST00000542685 CPSF1Q10570 1443 aaKnown RBP6.51□□□□□ -1.37
XRCC4-206ENST00000542685 DLC1Q96QB1 1528 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 DLG5Q8TDM6 1919 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 TMEM200CA6NKL6 621 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 EFCAB8A8MWE9 144 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 BRINP1O60477 761 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 NBPF7P0C2Y1 421 aaPredicted RBP6.51□□□□□ -1.37
XRCC4-206ENST00000542685 HSD3B2P26439 372 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 MASP1P48740 699 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 LMAN1P49257 510 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 FLT3LGP49771 235 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 TMPRSS15P98073 1019 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 PLCB4Q15147 1175 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 BEAN1Q3B7T3 259 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 CCDC38Q502W7 563 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 WLSQ5T9L3 541 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 HECTD2Q5U5R9 776 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 TRIM74Q86UV6 250 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 TRIM73Q86UV7 250 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 AMOTL1Q8IY63 956 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 CEP112Q8N8E3 955 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 PRPF38AQ8NAV1 312 aaKnown RBP6.51□□□□□ -1.37
XRCC4-206ENST00000542685 CPEB3Q8NE35 698 aaKnown RBP6.51□□□□□ -1.37
XRCC4-206ENST00000542685 ZFP28Q8NHY6 868 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 LMBR1Q8WVP7 490 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 GTF3C6Q969F1 213 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 DTNBP1Q96EV8 351 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 C16orf45Q96MC5 204 aaPredicted RBP6.51□□□□□ -1.37
XRCC4-206ENST00000542685 STK31Q9BXU1 1019 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 IFT122Q9HBG6 1241 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 IRAK4Q9NWZ3 460 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 ADAM21Q9UKJ8 722 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
XRCC4-206ENST00000542685 MAP3K2Q9Y2U5 619 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 ATP7BP35670 1465 aa6.51□□□□□ -1.37
XRCC4-206ENST00000542685 ABCC4O15439 1325 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 PHLPP2Q6ZVD8 1323 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 SYNRGQ9UMZ2 1314 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 COL4A3Q01955 1670 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 MLH3Q9UHC1 1453 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 UNC119BA6NIH7 251 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 CAND2O75155 1236 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 RTN2O75298 545 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 SPATA31D3P0C874 917 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 CASTP20810 708 aaKnown RBP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 ECHS1P30084 290 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 HNRNPH1P31943 449 aaKnown RBP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 PEX19P40855 299 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 CHN2P52757 468 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 G3BP1Q13283 466 aaKnown RBP eCLIP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 STAT4Q14765 748 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 BRD3Q15059 726 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 ADRM1Q16186 407 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 MUM1Q2TAK8 710 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 FAM47AQ5JRC9 791 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 ATXN7L2Q5T6C5 722 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 FAM102AQ5T9C2 384 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 SDE2Q6IQ49 451 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 SPATA31D4Q6ZUB0 917 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 Q6ZVL8 140 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 ARHGEF19Q8IW93 802 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 LCORLQ8N3X6 602 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 MAB21L3Q8N8X9 362 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 OR7D4Q8NG98 312 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 CTCFLQ8NI51 663 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 FATE1Q969F0 183 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 UHRF1Q96T88 793 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-206ENST00000542685 LZTS2Q9BRK4 669 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 ARFGAP3Q9NP61 516 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 SIGLEC1Q9BZZ2 1709 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 SSH2Q76I76 1423 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 EVC2Q86UK5 1308 aa6.5□□□□□ -1.37
XRCC4-206ENST00000542685 CD163L1Q9NR16 1453 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 RPAP1Q9BWH6 1393 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CCDC151A5D8V7 595 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 DRGXA6NNA5 263 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CXorf49A8MYA2 514 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 LIN7AO14910 233 aaPredicted RBP6.49□□□□□ -1.37
XRCC4-206ENST00000542685 NUDT3O95989 172 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CCDC192P0DO97 292 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 SCP2P22307 547 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 USP14P54578 494 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 GSDMDP57764 484 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 CLRN1P58418 232 aa6.49□□□□□ -1.37
XRCC4-206ENST00000542685 RAP2BP61225 183 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms