RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 KCTD17Q8N5Z5 321 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 RBBP8NLQ8NC74 664 aaPredicted RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 LRRN4Q8WUT4 740 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 UCMAQ8WVF2 138 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 MCUR1Q96AQ8 359 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 ANKEF1Q9NU02 776 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 ARL8BQ9NVJ2 186 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 GGA3Q9NZ52 723 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 DLGAP2Q9P1A6 1054 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 INO80B-WBP1J3KQ70 363 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 NCKAP1LP55160 1127 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 SP2Q02086 613 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 PDK4Q16654 411 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 MSS51Q4VC12 460 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 DCAF15Q66K64 600 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 PALM2Q8IXS6 379 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 LMNTD2Q8IXW0 634 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 TMEM130Q8N3G9 435 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 C10orf82Q8WW14 230 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 INO80BQ9C086 356 aaPredicted RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 PCSK1NQ9UHG2 260 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 ATP2A1O14983 1001 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 MAPTP10636 758 aaKnown RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 KITP10721 976 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 BRD2P25440 801 aaKnown RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 YARSP54577 528 aaKnown RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 BASP1P80723 227 aaKnown RBP16.11■□□□□ 0.17
CNOT9-208ENST00000542068 MOGSQ13724 837 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 CENPUQ71F23 418 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 MON1BQ7L1V2 547 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 TTC7BQ86TV6 843 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 ASAP3Q8TDY4 903 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 TEX13BQ9BXU2 312 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 CHMP2BQ9UQN3 213 aa16.11■□□□□ 0.17
CNOT9-208ENST00000542068 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 LGR5O75473 907 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 MAP3K6O95382 1288 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 GDF10P55107 478 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 TRPC3Q13507 836 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 KPNB1Q14974 876 aaKnown RBP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 HIF1AQ16665 826 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 C12orf56Q8IXR9 622 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 DNAJC9Q8WXX5 260 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 PTPRN2Q92932 1015 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 TEPSINQ96N21 525 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 MIPEPQ99797 713 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 PIDD1Q9HB75 910 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 AS3MTQ9HBK9 375 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 CCDC195A0A1B0GUA6 201 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 RGS20O76081 388 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 PGK2P07205 417 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 TROVE2P10155 538 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 PTPRAP18433 802 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 KCNA3P22001 575 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 SERPINB3P29508 390 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 TNFSF9P41273 254 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 NR1H3Q13133 447 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 RCN2Q14257 317 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 FNBP1LQ5T0N5 605 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 ZC3H18Q86VM9 953 aaKnown RBP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 DENND1AQ8TEH3 1009 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 TRAPPC12Q8WVT3 735 aa16.1■□□□□ 0.17
CNOT9-208ENST00000542068 MRPL47Q9HD33 250 aaKnown RBP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 MARCOQ9UEW3 520 aaPredicted RBP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
CNOT9-208ENST00000542068 TCRBV7S3A2A0A539 114 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 GYG2O15488 501 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 TJP3O95049 919 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 ATP4AP20648 1035 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 RFC5P40937 340 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 RASSF2P50749 326 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 NOMO3P69849 1222 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 PSMC3IPQ9P2W1 217 aaPredicted RBP16.09■□□□□ 0.17
CNOT9-208ENST00000542068 TTLL13PA6NNM8 815 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 LUC7L3O95232 432 aaKnown RBP16.09■□□□□ 0.17
CNOT9-208ENST00000542068 GLRA2P23416 452 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 GTF2H1P32780 548 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 GCLCP48506 637 aaPredicted RBP16.09■□□□□ 0.17
CNOT9-208ENST00000542068 GPX6P59796 221 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 STXBP2Q15833 593 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 DNAJC24Q6P3W2 148 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 FAM111AQ96PZ2 611 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 SYT15Q9BQS2 421 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 MTMR12Q9C0I1 747 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 COQ4Q9Y3A0 265 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 PPP1R12AO14974 1030 aaPredicted RBP16.09■□□□□ 0.17
CNOT9-208ENST00000542068 TCEA3O75764 348 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 GNAZP19086 355 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 IRX4P78413 519 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 OGDHQ02218 1023 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 ACVR2BQ13705 512 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 NCOA4Q13772 614 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 TSNAXIP1Q2TAA8 658 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 CLNKQ7Z7G1 428 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 CTAGE3PQ8IX95 158 aa16.09■□□□□ 0.17
CNOT9-208ENST00000542068 FBXO36Q8NEA4 188 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms