RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TMEM253P0C7T8 217 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 LILRA4P59901 499 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 NOX5Q96PH1 765 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 MMS19Q96T76 1030 aa29.54■■■□□ 2.32
CCM2-218ENST00000541586 ALG13Q9NP73 1137 aaKnown RBP29.54■■■□□ 2.32
CCM2-218ENST00000541586 PUF60Q9UHX1 559 aaKnown RBP29.54■■■□□ 2.32
CCM2-218ENST00000541586 ANKRD62A6NC57 917 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 TACC1O75410 805 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 CSPG5O95196 566 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 ABCB4P21439 1286 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 PPM1AP35813 382 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 TAF6P49848 677 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 KRT17Q04695 432 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 CLEC16AQ2KHT3 1053 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 CD300LGQ6UXG3 332 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 TRIM58Q8NG06 486 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 LRCH3Q96II8 777 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 CHD7Q9P2D1 2997 aa29.53■■■□□ 2.32
CCM2-218ENST00000541586 CILPO75339 1184 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 NAP1L1P55209 391 aaKnown RBP29.52■■■□□ 2.32
CCM2-218ENST00000541586 FBXO22Q8NEZ5 403 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 WHAMMQ8TF30 809 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 ZNF606Q8WXB4 792 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 CTNNBL1Q8WYA6 563 aaPredicted RBP29.52■■■□□ 2.32
CCM2-218ENST00000541586 ZNF560Q96MR9 790 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 SAMD11Q96NU1 681 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 PLVAPQ9BX97 442 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 SNX9Q9Y5X1 595 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 CHD9Q3L8U1 2897 aa29.52■■■□□ 2.32
CCM2-218ENST00000541586 CTAGE9A4FU28 777 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 SPTLC1O15269 473 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 CFHP08603 1231 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 DSTYKQ6XUX3 929 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 NAPGQ99747 312 aaPredicted RBP29.51■■■□□ 2.32
CCM2-218ENST00000541586 GPR62Q9BZJ7 368 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 THAP2Q9H0W7 228 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 PDCL3Q9H2J4 239 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 FAM124BQ9H5Z6 455 aaPredicted RBP29.51■■■□□ 2.32
CCM2-218ENST00000541586 ZNF576Q9H609 170 aa29.51■■■□□ 2.32
CCM2-218ENST00000541586 A0A0A6YYK5 440 aaPredicted RBP29.51■■■□□ 2.31
CCM2-218ENST00000541586 CARNS1A5YM72 827 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 PNPLA4P41247 253 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 RAD23BP54727 409 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 INCA1Q0VD86 236 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 TIGD5Q53EQ6 642 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 FUT10Q6P4F1 479 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 CEP57Q86XR8 500 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 ALS2CR12Q96Q35 445 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 HMGXB4Q9UGU5 601 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 KIAA1671Q9BY89 1806 aa29.51■■■□□ 2.31
CCM2-218ENST00000541586 KPNA7A9QM74 516 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 TMEM189-UBE2V1I3L0A0 370 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 URI1O94763 535 aaPredicted RBP29.5■■■□□ 2.31
CCM2-218ENST00000541586 CYP1A1P04798 512 aaPredicted RBP29.5■■■□□ 2.31
CCM2-218ENST00000541586 RB1P06400 928 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 UNGP13051 313 aaPredicted RBP29.5■■■□□ 2.31
CCM2-218ENST00000541586 BRD2P25440 801 aaKnown RBP29.5■■■□□ 2.31
CCM2-218ENST00000541586 SV2CQ496J9 727 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 ACAD10Q6JQN1 1059 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 TAS1R1Q7RTX1 841 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 TWNKQ96RR1 684 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 ZSWIM1Q9BR11 485 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 C11orf84Q9BUA3 381 aaPredicted RBP29.5■■■□□ 2.31
CCM2-218ENST00000541586 BARX2Q9UMQ3 279 aaPredicted RBP29.5■■■□□ 2.31
CCM2-218ENST00000541586 NCANO14594 1321 aa29.5■■■□□ 2.31
CCM2-218ENST00000541586 C5orf67F2Z3F1 127 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 TRAPPC3O43617 180 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 PAEPP09466 180 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 SSTR3P32745 418 aaPredicted RBP29.49■■■□□ 2.31
CCM2-218ENST00000541586 FAM171A1Q5VUB5 890 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 TRIM72Q6ZMU5 477 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 TTC39CQ8N584 583 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 ARHGEF26Q96DR7 871 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 CYFIP2Q96F07 1278 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 ELOVL4Q9GZR5 314 aa29.49■■■□□ 2.31
CCM2-218ENST00000541586 RFXAPO00287 272 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 PLCB3Q01970 1234 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 ORC1Q13415 861 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 GPM6BQ13491 265 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 PASD1Q8IV76 773 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 SLC4A11Q8NBS3 891 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 TFAP2BQ92481 460 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 B3GALT6Q96L58 329 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 TIMM13Q9Y5L4 95 aaPredicted RBP29.48■■■□□ 2.31
CCM2-218ENST00000541586 NLRC5Q86WI3 1866 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 SZT2Q5T011 3432 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 SF3B1O75533 1304 aaKnown RBP eCLIP29.48■■■□□ 2.312e-7■■■■■ 82.1
CCM2-218ENST00000541586 RIOK3O14730 519 aaKnown RBP29.48■■■□□ 2.31
CCM2-218ENST00000541586 NOP2P46087 812 aaKnown RBP29.48■■■□□ 2.31
CCM2-218ENST00000541586 RFFLQ8WZ73 363 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 TMEM176AQ96HP8 235 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 SENP8Q96LD8 212 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 GDAP2Q9NXN4 497 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 PCDHGC5Q9Y5F6 944 aa29.48■■■□□ 2.31
CCM2-218ENST00000541586 MYO9BQ13459 2157 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 EPOPA6NHQ4 379 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 CYB561D2O14569 222 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 ENC1O14682 589 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 NDST1P52848 882 aa29.47■■■□□ 2.31
CCM2-218ENST00000541586 GPC5P78333 572 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms