RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ACTRT3Q9BYD9 372 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 TRIM54Q9BYV2 358 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 METTL14Q9HCE5 456 aaKnown RBP7.57□□□□□ -1.2
YBX3-210ENST00000540975 KLC4Q9NSK0 619 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 GOLGA6AQ9NYA3 693 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 KLHL42Q9P2K6 505 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 XPR1Q9UBH6 696 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 TLK1Q9UKI8 766 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 INSL6Q9Y581 213 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 CCDC151A5D8V7 595 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 CAPN8A6NHC0 703 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 MGST3O14880 152 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 ATXN1LP0C7T5 689 aaKnown RBP7.56□□□□□ -1.2
YBX3-210ENST00000540975 CD6P30203 668 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 PTH2RP49190 550 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 MAPK10P53779 464 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 NANOS3P60323 173 aaKnown RBP7.56□□□□□ -1.2
YBX3-210ENST00000540975 ZNF362Q5T0B9 420 aaPredicted RBP7.56□□□□□ -1.2
YBX3-210ENST00000540975 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 SWSAP1Q6NVH7 229 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 IL31RAQ8NI17 732 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 FAM136AQ96C01 138 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 DUSP26Q9BV47 211 aa7.56□□□□□ -1.2
YBX3-210ENST00000540975 DDX20Q9UHI6 824 aaKnown RBP7.56□□□□□ -1.2
YBX3-210ENST00000540975 ADGRA2Q96PE1 1338 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 A6NNZ2 444 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 VIPR2P41587 438 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 GRIA3P42263 894 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 SLC11A2P49281 568 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 CACNA2D1P54289 1103 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 TXNRD1Q16881 649 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 SFRP4Q6FHJ7 346 aaPredicted RBP7.55□□□□□ -1.2
YBX3-210ENST00000540975 LAYNQ6UX15 382 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 PEG10Q86TG7 708 aaKnown RBP7.55□□□□□ -1.2
YBX3-210ENST00000540975 TTC8Q8TAM2 541 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 ANKS1AQ92625 1134 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 MOGAT1Q96PD6 335 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 PRDM13Q9H4Q3 707 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 KIAA1586Q9HCI6 787 aa7.55□□□□□ -1.2
YBX3-210ENST00000540975 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 FAM227AF5H4B4 570 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 MYO1CO00159 1063 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 BTN3A1O00481 513 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 RHOP08100 348 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 ELFN1P0C7U0 828 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 PXNP49023 591 aaPredicted RBP7.54□□□□□ -1.2
YBX3-210ENST00000540975 LILRA4P59901 499 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 CTBP1Q13363 440 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 CNN3Q15417 329 aaKnown RBP7.54□□□□□ -1.2
YBX3-210ENST00000540975 GFOD2Q3B7J2 385 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 ZNF783Q6ZMS7 281 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 SLC15A4Q8N697 577 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 DNAJC5GQ8N7S2 189 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 PTDSS2Q9BVG9 487 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 DPH1Q9BZG8 443 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 FAM204AQ9H8W3 233 aa7.54□□□□□ -1.2
YBX3-210ENST00000540975 USP19O94966 1318 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 MYO1FO00160 1098 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 PPM1DO15297 605 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 LOXL3P58215 753 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 ICE2Q659A1 982 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 CHST15Q7LFX5 561 aaPredicted RBP7.53□□□□□ -1.2
YBX3-210ENST00000540975 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 FAM98AQ8NCA5 519 aaKnown RBP7.53□□□□□ -1.2
YBX3-210ENST00000540975 OR6B3Q8NGW1 331 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 RFKQ969G6 155 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 CRAMP1Q96RY5 1269 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 ALG8Q9BVK2 526 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 C22orf23Q9BZE7 217 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 SLC17A6Q9P2U8 582 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 DKK3Q9UBP4 350 aa7.53□□□□□ -1.2
YBX3-210ENST00000540975 CFAP69A5D8W1 941 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 ORC4O43929 436 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 TBC1D4O60343 1298 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 CYP2C9P11712 490 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 EN2P19622 333 aaPredicted RBP7.52□□□□□ -1.21
YBX3-210ENST00000540975 SLC7A1P30825 629 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 GRM3Q14832 879 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 TBCCQ15814 346 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 LMBRD2Q68DH5 695 aaPredicted RBP7.52□□□□□ -1.21
YBX3-210ENST00000540975 FBXO42Q6P3S6 717 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 APOA5Q6Q788 366 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 DTX2Q86UW9 622 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 ADGRG3Q86Y34 549 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 FKBP10Q96AY3 582 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 PUS7Q96PZ0 661 aaKnown RBP7.52□□□□□ -1.21
YBX3-210ENST00000540975 MESP1Q9BRJ9 268 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 SMURF2Q9HAU4 748 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 SERHLQ9NQF3 203 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 SEMA4GQ9NTN9 838 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 SSX2IPQ9Y2D8 614 aa7.52□□□□□ -1.21
YBX3-210ENST00000540975 A0A087WWL8 130 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 MARCH6O60337 910 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 PDHA1P08559 390 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 NR2F6P10588 404 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 XRCC6P12956 609 aaKnown RBP eCLIP7.51□□□□□ -1.21
YBX3-210ENST00000540975 GBX1Q14549 363 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 SRGAP1Q7Z6B7 1085 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms