RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SGO2Q562F6 1265 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 OR6B3Q8NGW1 331 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 SELENOOQ9BVL4 669 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 ZNF518BQ9C0D4 1074 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 DDX47Q9H0S4 455 aaKnown RBP12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 CARD9Q9H257 536 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 GDAP2Q9NXN4 497 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 PHF24Q9UPV7 400 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 USTQ9Y2C2 406 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 MIF4GDA9UHW6 222 aaKnown RBP12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 RAD51CO43502 376 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 MED7O43513 233 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 ATP2C2O75185 946 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 CALB1P05937 261 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 GLI1P08151 1106 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 CCDC130P13994 396 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 CLCNKBP51801 687 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 PDCLQ13371 301 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 GPNMBQ14956 572 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 WDR93Q6P2C0 686 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 DNAJC24Q6P3W2 148 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 LCLAT1Q6UWP7 414 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 XYLT1Q86Y38 959 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 DDX27Q96GQ7 796 aaKnown RBP12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 TTC7AQ9ULT0 858 aaPredicted RBP12.99□□□□□ -0.33
AP003559.1-201ENST00000540906 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 ESYT3A0FGR9 886 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 CASTOR2A6NHX0 329 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 A8MXQ7 604 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 F8VP50 259 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 MYO1FO00160 1098 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 ARVCFO00192 962 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 KRIT1O00522 736 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 B4GALT3O60512 393 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 TKTP29401 623 aaKnown RBP12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 RGS7P49802 495 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 PSMC1P62191 440 aaKnown RBP12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 LONRF2Q1L5Z9 754 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 TCTN1Q2MV58 587 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 ATP13A4Q4VNC1 1196 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 BEND6Q5SZJ8 279 aaPredicted RBP12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 KIAA0319Q5VV43 1072 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 TXNRD3NBQ6F5E7 133 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 TRNP1Q6NT89 227 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 EMC1Q8N766 993 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 GIT1Q9Y2X7 761 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
AP003559.1-201ENST00000540906 A0A0U1RQF3 1178 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 F8W810 466 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ZNF623O75123 536 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 POMCP01189 267 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ACAT1P24752 427 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 CDK7P50613 346 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 PRMT2P55345 433 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 BRD3Q15059 726 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 SIX1Q15475 284 aaPredicted RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 RAB6CQ53S08 254 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 WSCD1Q658N2 575 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 C8orf74Q6P047 294 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 PMF1Q6P1K2 205 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ZNF598Q86UK7 904 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ADGRF2Q8IZF7 708 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 C3orf20Q8ND61 904 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TSPAN18Q96SJ8 248 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 RAB6CQ9H0N0 254 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 MRPL47Q9HD33 250 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 KLHL11Q9NVR0 708 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 CEP83Q9Y592 693 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 CCDC66A2RUB6 948 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 E5RJQ4 531 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 I3L4J1 428 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 PODXLO00592 558 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 CYB561D2O14569 222 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 XPOTO43592 962 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 RPLP2P05387 115 aaKnown RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 THP07101 528 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 ADORA2BP29275 332 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 GJC1P36383 396 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 GNL1P36915 607 aaPredicted RBP12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 GABRB2P47870 512 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TUBB4BP68371 445 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 TAF5Q15542 800 aa12.97□□□□□ -0.33
AP003559.1-201ENST00000540906 SV2CQ496J9 727 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms