RNA–Protein interactions for RNA: ENST00000540028.5

PCSK7-215, Transcript of proprotein convertase subtilisin/kexin type 7, human

TSL 2 BASIC

Gene PCSK7, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCSK7-215	ENST00000540028	ATXN2	Q99700	1313 aa	Known RBP	13.58	□□□□□ -0.24
PCSK7-215	ENST00000540028		H7C0C1	242 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	TARS	P26639	723 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	CDC25C	P30307	473 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ATP5O	P48047	213 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	GDF10	P55107	478 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	WDR4	P57081	412 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	MAP3K10	Q02779	954 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	NAA25	Q14CX7	972 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	HADH	Q16836	314 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	SGSM1	Q2NKQ1	1148 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	TMEM63B	Q5T3F8	832 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	PHF13	Q86YI8	300 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	N4BP2L2	Q92802	583 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	TMEM109	Q9BVC6	243 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	NGRN	Q9NPE2	291 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	DNALI1	O14645	258 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ATP6V1G2	O95670	118 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ASS1	P00966	412 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ALDH5A1	P51649	535 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	SPARCL1	Q14515	664 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	FBF1	Q8TES7	1133 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	STAMBPL1	Q96FJ0	436 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ANKRD36BP1	Q96IX9	119 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	SPATA33	Q96N06	139 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	QSER1	Q2KHR3	1735 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028		A0A0G2JND7	137 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028		H0Y3Z8	333 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	POLR2B	P30876	1174 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	COPS2	P61201	443 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ZBTB16	Q05516	673 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ANKRD22	Q5VYY1	191 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	OR6B2	Q6IFH4	312 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	DARS2	Q6PI48	645 aa	Known RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	LVRN	Q6Q4G3	990 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	ZBED3	Q96IU2	234 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	PHTF1	Q9UMS5	762 aa		13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.57	□□□□□ -0.24
PCSK7-215	ENST00000540028	C19orf81	C9J6K1	198 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028		M0QYV0	167 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	OGT	O15294	1046 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ITGB3	P05106	788 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	KRT16	P08779	473 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	RBP3	P10745	1247 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ARL2	P36404	184 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ZNF252P-AS1	Q0IIN9	211 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	MMRN1	Q13201	1228 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	XRCC4	Q13426	336 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ACCSL	Q4AC99	568 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	PTPN20	Q4JDL3	420 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	FAM228A	Q86W67	206 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	FBXO16	Q8IX29	292 aa	Predicted RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ZCCHC9	Q8N567	271 aa	Known RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	SPATA18	Q8TC71	538 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	NPHS2	Q9NP85	383 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	HAO1	Q9UJM8	370 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	CNTNAP2	Q9UHC6	1331 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	BAG6	P46379	1132 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	VCP	P55072	806 aa	Known RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	RNASEL	Q05823	741 aa	Known RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	LACTB2	Q53H82	288 aa	Predicted RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	NPNT	Q6UXI9	565 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	BRSK2	Q8IWQ3	736 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	P3H4	Q92791	437 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	LRRC37B	Q96QE4	947 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	RPF1	Q9H9Y2	349 aa	Known RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	GPATCH2L	Q9NWQ4	482 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	BTBD7	Q9P203	1132 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	FARP2	O94887	1054 aa	Predicted RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	TAC1	P20366	129 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	MSH2	P43246	934 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	CDH6	P55285	790 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	RTP1	P59025	263 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	EIF3E	P60228	445 aa	Known RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	PIGH	Q14442	188 aa	Predicted RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	EAPP	Q56P03	285 aa	Predicted RBP	13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	SH3PXD2A	Q5TCZ1	1133 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ATF7IP2	Q5U623	682 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	EFCAB12	Q6NXP0	572 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	MOB2	Q70IA6	237 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	PDIK1L	Q8N165	341 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	C7orf31	Q8N865	590 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	KLRG1	Q96E93	195 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	ELP3	Q9H9T3	547 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	AKT3	Q9Y243	479 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	CSAD	Q9Y600	493 aa		13.56	□□□□□ -0.24
PCSK7-215	ENST00000540028	AVIL	O75366	819 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	NQO1	P15559	274 aa	Known RBP	13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	IL1R2	P27930	398 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	ALDH3A1	P30838	453 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	CLNS1A	P54105	237 aa	Known RBP	13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	NCALD	P61601	193 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	NEDD9	Q14511	834 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	SLC1A5	Q15758	541 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	WDTC1	Q8N5D0	677 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	FBXO36	Q8NEA4	188 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	REPS2	Q8NFH8	660 aa		13.55	□□□□□ -0.24
PCSK7-215	ENST00000540028	SLCO2A1	Q92959	643 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms