RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PAX3P23760 479 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 CXCR5P32302 372 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 SSTR3P32745 418 aaPredicted RBP17.88■□□□□ 0.45
COPS3-212ENST00000539941 MBTPS1Q14703 1052 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 ZSCAN26Q16670 478 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 PRPF38BQ5VTL8 546 aaKnown RBP17.88■□□□□ 0.45
COPS3-212ENST00000539941 DENND1BQ6P3S1 775 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 LCLAT1Q6UWP7 414 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 ERICH1Q86X53 443 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 WDTC1Q8N5D0 677 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 GPR161Q8N6U8 529 aaKnown RBP17.88■□□□□ 0.45
COPS3-212ENST00000539941 PSMB7Q99436 277 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 NCAPGQ9BPX3 1015 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 WNT8AQ9H1J5 351 aa17.88■□□□□ 0.45
COPS3-212ENST00000539941 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
COPS3-212ENST00000539941 FAM170AA1A519 330 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 PDE2AO00408 941 aaPredicted RBP17.87■□□□□ 0.45
COPS3-212ENST00000539941 MICAL2O94851 1124 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 SLC1A1P43005 524 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 GSCP56915 257 aaPredicted RBP17.87■□□□□ 0.45
COPS3-212ENST00000539941 TAP1Q03518 808 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 GRIK3Q13003 919 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 MAMLD1Q13495 774 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 MESDQ14696 234 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 SLC24A5Q71RS6 500 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 UBL4BQ8N7F7 174 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 ANAPC7Q9UJX3 599 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 C9IYK1 514 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 MYO1FO00160 1098 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 WARSP23381 471 aaKnown RBP17.87■□□□□ 0.45
COPS3-212ENST00000539941 SCNN1GP51170 649 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 ORC1Q13415 861 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 ARHGAP17Q68EM7 881 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 UBE2Q1Q7Z7E8 422 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 CRYBG2Q8N1P7 616 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 OR6B3Q8NGW1 331 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 ACTRT1Q8TDG2 376 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 DDX27Q96GQ7 796 aaKnown RBP17.87■□□□□ 0.45
COPS3-212ENST00000539941 MIS12Q9H081 205 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 CRISPLD2Q9H0B8 497 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 CARD9Q9H257 536 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 SNX25Q9H3E2 840 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 MIOSQ9NXC5 875 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 WDR35Q9P2L0 1181 aa17.87■□□□□ 0.45
COPS3-212ENST00000539941 CHORDC1Q9UHD1 332 aaPredicted RBP17.87■□□□□ 0.45
COPS3-212ENST00000539941 A8MXQ7 604 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 M0QYV0 167 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 PODXLO00592 558 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 DDX3YO15523 660 aaKnown RBP17.86■□□□□ 0.45
COPS3-212ENST00000539941 SETSIPP0DME0 302 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 COL6A1P12109 1028 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 COMTP21964 271 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 CTNNA2P26232 953 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 GNL1P36915 607 aaPredicted RBP17.86■□□□□ 0.45
COPS3-212ENST00000539941 DNA2P51530 1060 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 FAM189BP81408 668 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 CLUL1Q15846 466 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 ADGRF2Q8IZF7 708 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 RASGEF1CQ8N431 466 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 C3orf20Q8ND61 904 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 CD101Q93033 1021 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 UROC1Q96N76 676 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 L1RE1Q9UN81 338 aa17.86■□□□□ 0.45
COPS3-212ENST00000539941 TCRBV5S1A1TA0A578 114 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 TMEM110-MUSTN1A8MSY1 372 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 SPOPO43791 374 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 GPD2P43304 727 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 PTPN20Q4JDL3 420 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 DNAJC24Q6P3W2 148 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 SRLQ86TD4 932 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 TMEM86AQ8N2M4 240 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 SPATA4Q8NEY3 305 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 FEZF2Q8TBJ5 459 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 SPATA18Q8TC71 538 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 TNIP3Q96KP6 325 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 TSPAN16Q9UKR8 245 aa17.85■□□□□ 0.45
COPS3-212ENST00000539941 TTC7AQ9ULT0 858 aaPredicted RBP17.85■□□□□ 0.45
COPS3-212ENST00000539941 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
COPS3-212ENST00000539941 CYB561D2O14569 222 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 PARNO95453 639 aaKnown RBP17.84■□□□□ 0.45
COPS3-212ENST00000539941 MAN1A1P33908 653 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 GABRB2P47870 512 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
COPS3-212ENST00000539941 C2CD6Q53TS8 623 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 ANKRD33Q7Z3H0 272 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 ACOT1Q86TX2 421 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 RTN4RL1Q86UN2 441 aaPredicted RBP17.84■□□□□ 0.45
COPS3-212ENST00000539941 MMGT1Q8N4V1 131 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 APBB2Q92870 758 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 C18orf8Q96DM3 657 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 NME7Q9Y5B8 376 aa17.84■□□□□ 0.45
COPS3-212ENST00000539941 PGRMC1O00264 195 aaKnown RBP17.83■□□□□ 0.45
COPS3-212ENST00000539941 PROSCO94903 275 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 TUBBP07437 444 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 CTNNA1P35221 906 aaKnown RBP17.83■□□□□ 0.45
COPS3-212ENST00000539941 AARSP49588 968 aaKnown RBP eCLIP17.83■□□□□ 0.45
COPS3-212ENST00000539941 CLCNKBP51801 687 aa17.83■□□□□ 0.45
COPS3-212ENST00000539941 PDCLQ13371 301 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms