RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SNRPFP62306 86 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 KRT85P78386 507 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PSMD6Q15008 389 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 NFE2Q16621 373 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 KNOP1Q1ED39 458 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 YAF2Q8IY57 180 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 E2F7Q96AV8 911 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GCNAQ96QF7 691 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PKMYT1Q99640 499 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 OSBPL6Q9BZF3 934 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 EXOC1Q9NV70 894 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SPATA6Q9NWH7 488 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GTF3C4Q9UKN8 822 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DMDP11532 3685 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PRR23AA6NEV1 266 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 GABRDO14764 452 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CYP2F1P24903 491 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CDC25CP30307 473 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 LHX1P48742 406 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 STK4Q13043 487 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TRAPPC11Q7Z392 1133 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 NKD2Q969F2 451 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 LRRC3BQ96PB8 259 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CGRRF1Q99675 332 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SMG9Q9H0W8 520 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TASP1Q9H6P5 420 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 NDRG2Q9UN36 371 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MAGED2Q9UNF1 606 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ZFHX2Q9C0A1 2572 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MIA3Q5JRA6 1907 aa20.45■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MYBPHLA2RUH7 354 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 DPYSL4O14531 572 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ATP2C2O75185 946 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SP9P0CG40 484 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 HMGA1P17096 107 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 LMO2P25791 158 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PCSK1P29120 753 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PSMC1P62191 440 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 DDR2Q16832 855 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 KIAA0895Q8NCT3 520 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SPATA18Q8TC71 538 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 KBTBD7Q8WVZ9 684 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MMS19Q96T76 1030 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 NELL2Q99435 816 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TRPV5Q9NQA5 729 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MRPS17Q9Y2R5 130 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PIAS3Q9Y6X2 628 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 R4GN57 208 aa20.44■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ARNTLO00327 626 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 EXOC3O60645 756 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PRAMEF12O95522 483 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CST3P01034 146 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 LIMS2Q7Z4I7 341 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TMEM150AQ86TG1 271 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SPATA2LQ8IUW3 424 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 C12orf56Q8IXR9 622 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MAML2Q8IZL2 1156 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ZNF516Q92618 1163 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ZFYVE19Q96K21 471 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SYT15Q9BQS2 421 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SLC46A2Q9BY10 475 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 GZF1Q9H116 711 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ABCB6Q9NP58 842 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CGNQ9P2M7 1197 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 HPSEQ9Y251 543 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TICRRQ7Z2Z1 1910 aa20.43■□□□□ 0.86
TNFRSF1A-212ENST00000539372 COL4A2P08572 1712 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MAN2B1O00754 1011 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CHADO15335 359 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 NCAM2O15394 837 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PDGFRBP09619 1106 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SYKP43405 635 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CASP4P49662 377 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 NDUFA8P51970 172 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 NLRP12P59046 1061 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 FCHO2Q0JRZ9 810 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 FZD5Q13467 585 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 DPH6Q7L8W6 267 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SCN4BQ8IWT1 228 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MAB21L3Q8N8X9 362 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TTC8Q8TAM2 541 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CSGALNACT1Q8TDX6 532 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 FAM3CQ92520 227 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CLDN23Q96B33 292 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 MRPL45Q9BRJ2 306 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 USP25Q9UHP3 1055 aa20.42■□□□□ 0.86
TNFRSF1A-212ENST00000539372 LAMTOR5O43504 91 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 F11P03951 625 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CSH1P0DML2 217 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CSH2P0DML3 217 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 WARSP23381 471 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 CCNE1P24864 410 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 SOX9P48436 509 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 RPL10AP62906 217 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 TXNDC8Q6A555 127 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 FAM171BQ6P995 826 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 ZNF687Q8N1G0 1237 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 GOLGA5Q8TBA6 731 aa20.41■□□□□ 0.86
TNFRSF1A-212ENST00000539372 PLEKHO2Q8TD55 490 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms