RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	TNNC1	P63316	161 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FKBP3	Q00688	224 aa	Known RBP	13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	STIM1	Q13586	685 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	NCOA4	Q13772	614 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	WDR72	Q3MJ13	1102 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MGAT5B	Q3V5L5	792 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TDRD10	Q5VZ19	366 aa	Known RBP	13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CEP135	Q66GS9	1140 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PARM1	Q6UWI2	310 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	CLEC17A	Q6ZS10	378 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SV2A	Q7L0J3	742 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SMARCD2	Q92925	531 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TRMT2B	Q96GJ1	504 aa	Known RBP	13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	IRF2BPL	Q9H1B7	796 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ZFP14	Q9HCL3	533 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SLC27A5	Q9Y2P5	690 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	F5	P12259	2224 aa		13.17	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DENND4C	Q5VZ89	1909 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SLC16A3	O15427	465 aa	Known RBP	13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	STX10	O60499	249 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ASS1	P00966	412 aa	Known RBP	13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PFKL	P17858	780 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ATF6	P18850	670 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	GNL1	P36915	607 aa	Predicted RBP	13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PRCP	P42785	496 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MYL6	P60660	151 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PRKCQ	Q04759	706 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	BIRC3	Q13489	604 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ARHGAP15	Q53QZ3	475 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ZNF667	Q5HYK9	610 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ASTL	Q6HA08	431 aa	Predicted RBP	13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	UNC93A	Q86WB7	457 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	OSTM1	Q86WC4	334 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FAM186B	Q8IYM0	893 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	HS6ST3	Q8IZP7	471 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ADSSL1	Q8N142	457 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TRIML1	Q8N9V2	468 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SHKBP1	Q8TBC3	707 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MYCBPAP	Q8TBZ2	947 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	RSAD2	Q8WXG1	361 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DNASE1L2	Q92874	299 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TCEAL4	Q96EI5	215 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SHD	Q96IW2	340 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SPATA17	Q96L03	361 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MMS19	Q96T76	1030 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TSG101	Q99816	390 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SYT15	Q9BQS2	421 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ABI2	Q9NYB9	513 aa	Predicted RBP	13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	EHD2	Q9NZN4	543 aa		13.16	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PTPRD	P23468	1912 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	PSMA7	O14818	248 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	NOL4	O94818	638 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	VNN1	O95497	513 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MYL4	P12829	197 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	HMGA1	P17096	107 aa	Known RBP	13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FCAR	P24071	287 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	AVPR2	P30518	371 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	STARD6	P59095	220 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	ZNF699	Q32M78	642 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	C1orf220	Q5T0J3	134 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SCARA3	Q6AZY7	606 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	C1orf228	Q6PIY5	440 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	GAREM2	Q75VX8	874 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TTC39C	Q8N584	583 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TTC9B	Q8N6N2	239 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MCRS1	Q96EZ8	462 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TNIP3	Q96KP6	325 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	GCNA	Q96QF7	691 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SEPT5	Q99719	369 aa	Predicted RBP	13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	OSBPL6	Q9BZF3	934 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	IMPG2	Q9BZV3	1241 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	SNX25	Q9H3E2	840 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TASP1	Q9H6P5	420 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	IL21	Q9HBE4	155 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TMEM8A	Q9HCN3	771 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	TMLHE	Q9NVH6	421 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	GTF3C4	Q9UKN8	822 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	FBXL21	Q9UKT6	434 aa		13.15	□□□□□ -0.3
CLTCL1-205	ENST00000538828	KMT2E	Q8IZD2	1858 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MYBPHL	A2RUH7	354 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TRIM66	O15016	1216 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PMM2	O15305	246 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	F11	P03951	625 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	EPB41	P11171	864 aa	Known RBP	13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	GLUL	P15104	373 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PSMC3	P17980	439 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TRIM21	P19474	475 aa	Known RBP	13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	AOC1	P19801	751 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	CCNE1	P24864	410 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	LMO2	P25791	158 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	GABRR2	P28476	465 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PPP3CC	P48454	512 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	DLG4	P78352	724 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TAF12	Q16514	161 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	FAM78A	Q5JUQ0	283 aa		13.14	□□□□□ -0.31
CLTCL1-205	ENST00000538828	KRT39	Q6A163	491 aa		13.14	□□□□□ -0.31

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