RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 MFAP3P55082 362 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ARHGAP4P98171 946 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 P3H1Q32P28 736 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 DNAL1Q4LDG9 190 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 TMEM259Q4ZIN3 620 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 EPC2Q52LR7 807 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 C3orf67Q6ZVT6 689 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ZNF720Q7Z2F6 126 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ADGRG6Q86SQ4 1221 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PRUNE1Q86TP1 453 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 NDUFAF2Q8N183 169 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 LRRC47Q8N1G4 583 aaKnown RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 RFWD2Q8NHY2 731 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 TRIM11Q96F44 468 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 GPR101Q96P66 508 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PHACTR1Q9C0D0 580 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 STK32BQ9NY57 414 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 KCND2Q9NZV8 630 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 KANSL3Q9P2N6 904 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 POLIQ9UNA4 740 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 JAG2Q9Y219 1238 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 SSX2IPQ9Y2D8 614 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 MAGED1Q9Y5V3 778 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ATRNL1Q5VV63 1379 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 EMSYQ7Z589 1322 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 FAM170AA1A519 330 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 F5H6K3 240 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 DNALI1O14645 258 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 PMM2O15305 246 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 CYP1A1P04798 512 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 MYL3P08590 195 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 KLRC2P26717 231 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SERPINB3P29508 390 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 BTDP43251 543 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 PPP2R5CQ13362 524 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 NFE2Q16621 373 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 CERKLQ49MI3 558 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ACAD10Q6JQN1 1059 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 AAGABQ6PD74 315 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 CENPUQ71F23 418 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 MYLK4Q86YV6 388 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ARHGEF19Q8IW93 802 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SCUBE1Q8IWY4 988 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 VMP1Q96GC9 406 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SLX1AQ9BQ83 275 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 NEUROD4Q9HD90 331 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SEPT3Q9UH03 358 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ANAPC7Q9UJX3 599 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 WASF2Q9Y6W5 498 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 RGS2P41220 211 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 VAMP7P51809 220 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 FMO1Q01740 532 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ASPHQ12797 758 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 KLF1Q13351 362 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 COG2Q14746 738 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 R3HDM1Q15032 1099 aaKnown RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 TBCCQ15814 346 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SPATA24Q86W54 205 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 IRGQQ8WZA9 623 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SLC5A5Q92911 643 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 LENG1Q96BZ8 264 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ASB16Q96NS5 453 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 UIMC1Q96RL1 719 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 DDX50Q9BQ39 737 aaKnown RBP9.47□□□□□ -0.89
SNHG1-209ENST00000538654 TMEM120AQ9BXJ8 343 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 PREBQ9HCU5 417 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 ZNF536O15090 1300 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 NFASCO94856 1347 aa9.47□□□□□ -0.89
SNHG1-209ENST00000538654 SFI1A8K8P3 1242 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L15C9J2P7 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 BTBD19C9JJ37 291 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L11C9JVI0 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L18D6R9N7 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L22D6RA61 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L19D6RCP7 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L20D6RJB6 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 ALOX15BO15296 676 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 PSTPIP1O43586 416 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 OPHN1O60890 802 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 ASLP04424 464 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 ATP5BP06576 529 aaKnown RBP9.46□□□□□ -0.89
SNHG1-209ENST00000538654 PIK3CAP42336 1068 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 ACTR3P61158 418 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 MAP3K10Q02779 954 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 USP17L24Q0WX57 530 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 MED21Q13503 144 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 DLGAP5Q15398 846 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 EFHC2Q5JST6 749 aa9.46□□□□□ -0.89
SNHG1-209ENST00000538654 MAP3K21Q5TCX8 1036 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms