RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 DTNAQ9Y4J8 743 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 A0A1W2PQJ5 194 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 C2orf81A6NN90 581 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 SOAT2O75908 522 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 URODP06132 367 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 YY1P25490 414 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 SOAT1P35610 550 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 GEMP55040 296 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 RPL10AP62906 217 aaKnown RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 SGO1Q5FBB7 561 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 JAMLQ86YT9 394 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 WDR48Q8TAF3 677 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 BTN2A2Q8WVV5 523 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 FBXO32Q969P5 355 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 HES6Q96HZ4 224 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 PAWRQ96IZ0 340 aaKnown RBP17.51■□□□□ 0.39
SCARB1-205ENST00000538291 KCNK16Q96T55 309 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.51■□□□□ 0.393e-8■□□□□ 10.2
SCARB1-205ENST00000538291 ALG6Q9Y672 507 aa17.51■□□□□ 0.39
SCARB1-205ENST00000538291 PNPLA6Q8IY17 1366 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 FAM47DPA6NHR8 397 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 ANKRD65E5RJM6 399 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 SUPT20HL2P0C7V6 817 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 MAGEA4P43358 317 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 POU4F1Q01851 419 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 TERF2Q15554 542 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 TTC39BQ5VTQ0 682 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 C16orf89Q6UX73 402 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 IFNEQ86WN2 208 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 C1orf131Q8NDD1 294 aaKnown RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 FBXO28Q9NVF7 368 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 KIAA1257Q9ULG3 409 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 ABCA9Q8IUA7 1624 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 NCALDP61601 193 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 RASGRP2Q7LDG7 609 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 BHMTQ93088 406 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 MED14O60244 1454 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 CKMP06732 381 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 CENPPQ6IPU0 288 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 AGPAT3Q9NRZ7 376 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 SPASTQ9UBP0 616 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 MARCOQ9UEW3 520 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 EVPLLA8MZ36 301 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 LZTS3O60299 673 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 MMP14P50281 582 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 EPC2Q52LR7 807 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 LRRC23Q53EV4 343 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-205ENST00000538291 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 GID8Q9NWU2 228 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 IPPQ9Y573 584 aa17.5■□□□□ 0.39
SCARB1-205ENST00000538291 AKAP10O43572 662 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 PMPCBO75439 489 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 KLHL2O95198 593 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 F9P00740 461 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 APOA4P06727 396 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 FDFT1P37268 417 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 BACE1P56817 501 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 KCNK10P57789 538 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 NR1I3Q14994 352 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 C9orf131Q5VYM1 1079 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 BBS7Q8IWZ6 715 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 PPIL6Q8IXY8 311 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 CLEC4FQ8N1N0 589 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 FAM162AQ96A26 154 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 OLFM3Q96PB7 478 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 NPHS2Q9NP85 383 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 CACNA2D2Q9NY47 1150 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 TRMT6Q9UJA5 497 aaKnown RBP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 C16orf96A6NNT2 1141 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 KRT8P05787 483 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 SKOR1P84550 965 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 MDH1BQ5I0G3 518 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 YME1L1Q96TA2 773 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 WWOXQ9NZC7 414 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 SLC39A10Q9ULF5 831 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 LRRC7Q96NW7 1537 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 NAMPTP43490 491 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 GUCY1A3Q02108 690 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 FAM71DQ8N9W8 422 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 STAMBPL1Q96FJ0 436 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 FAM118BQ9BPY3 351 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 ARHGEF9O43307 516 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 SEC24DO94855 1032 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 PGK2P07205 417 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 ALOX15P16050 662 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 FXR1P51114 621 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 VSNL1P62760 191 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 MRNIPQ6NTE8 343 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 TRIM65Q6PJ69 517 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 GBA2Q9HCG7 927 aaPredicted RBP17.49■□□□□ 0.39
SCARB1-205ENST00000538291 TRPM5Q9NZQ8 1165 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 PRR23AA6NEV1 266 aa17.49■□□□□ 0.39
SCARB1-205ENST00000538291 SERPINB10P48595 397 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms