RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DPP7Q9UHL4 492 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 FBXL5Q9UKA1 691 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ADGRG1Q9Y653 693 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 MED1Q15648 1581 aaPredicted RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 GLTPD2A6NH11 291 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 USP27XA6NNY8 438 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SUPT3HB4E1H0 165 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 GOLGA8RI6L899 631 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 DIAPH2O60879 1101 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SUPT3HO75486 399 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 MAP3K6O95382 1288 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SMIM10L2AP0DMW4 78 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SMIM10L2BP0DMW5 78 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 CELF3Q5SZQ8 465 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 MFSD4BQ5TF39 518 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 WDR49Q8IV35 697 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SPATA18Q8TC71 538 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 DACT3Q96B18 629 aaPredicted RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 APBA2Q99767 749 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 RSAD1Q9HA92 442 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TLR8Q9NR97 1041 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 THG1LQ9NWX6 298 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 CD274Q9NZQ7 290 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.6□□□□□ -1.51
LRP6-203ENST00000538239 CDY2AQ9Y6F7 541 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ZNF263O14978 683 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SLC2A3P11169 496 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 VDRP11473 427 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 HMOX2P30519 316 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 CYP24A1Q07973 514 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 CCDC38Q502W7 563 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SLC39A12Q504Y0 691 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 FBXO47Q5MNV8 452 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TRMT10CQ7L0Y3 403 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 CACUL1Q86Y37 369 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 KCTD17Q8N5Z5 321 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 RFWD2Q8NHY2 731 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 LZICQ8WZA0 190 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 MKNK1Q9BUB5 465 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 NFKBIZQ9BYH8 718 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 RASSF4Q9H2L5 321 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 GPATCH2LQ9NWQ4 482 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SMPD4Q9NXE4 827 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 PPARGC1AQ9UBK2 798 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 CRLS1Q9UJA2 301 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 VPS28Q9UK41 221 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 PCDHB5Q9Y5E4 795 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 CCDC151A5D8V7 595 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SLC15A5A6NIM6 579 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SPDYE5A6NIY4 337 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 PMPCBO75439 489 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 COMTP21964 271 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 MUTP22033 750 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SPDYE7PQ495Y7 208 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ANKRD20A4Q4UJ75 823 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ANKRD20A8PQ5CZ79 823 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ANKRD20A2Q5SQ80 823 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ANKRD20A1Q5TYW2 823 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 FKBP1CQ5VVH2 108 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 NUGGCQ68CJ6 796 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SLC27A1Q6PCB7 646 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 FAM47EQ6ZV65 393 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ZNF677Q86XU0 584 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ATL2Q8NHH9 583 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TFB1MQ8WVM0 346 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 A0A1B0GTH6 734 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 PPP1R3GB7ZBB8 358 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 MSCO60682 206 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 BCAT1P54687 386 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 OXCT1P55809 520 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TBCCQ15814 346 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ZSCAN26Q16670 478 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ACAD10Q6JQN1 1059 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 LCA5Q86VQ0 697 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 WDR75Q8IWA0 830 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 PDCD7Q8N8D1 485 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 BLOC1S5Q8TDH9 187 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 SLC26A7Q8TE54 656 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 Q9H521 79 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 APOBEC2Q9Y235 224 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 ADGRA2Q96PE1 1338 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ANO9A1A5B4 782 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 P4HA2O15460 535 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 PCDH8O95206 1070 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 RHOCP08134 193 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ESRRAP11474 423 aaPredicted RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 TKTL1P51854 596 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 CASP8Q14790 479 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 PKN1Q16512 942 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TAF2Q6P1X5 1199 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TRAPPC11Q7Z392 1133 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 HIPK4Q8NE63 616 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 EDEM1Q92611 657 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TRIM51Q9BSJ1 452 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 MRPL9Q9BYD2 267 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 PITPNM3Q9BZ71 974 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.6□□□□□ -1.51
LRP6-203ENST00000538239 DBR1Q9UK59 544 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms