RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 AAK1Q2M2I8 961 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 LILRA6Q6PI73 481 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 EP400NLQ6ZTU2 488 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 TRAPPC11Q7Z392 1133 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 CTAGE6Q86UF2 777 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 CTAGE4Q8IX94 777 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 LRRC52Q8N7C0 313 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 APPL2Q8NEU8 664 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 CASP10Q92851 521 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 ZNF560Q96MR9 790 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 CHP1Q99653 195 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 TSG101Q99816 390 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 MKNK1Q9BUB5 465 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 FUT8Q9BYC5 575 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 ANKZF1Q9H8Y5 726 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 MYO6Q9UM54 1294 aa12.32□□□□□ -0.44
SNHG1-206ENST00000537925 BARX2Q9UMQ3 279 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-206ENST00000537925 PTPRDP23468 1912 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 LRRIQ3A6PVS8 624 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 CETN3O15182 167 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 ADAM12O43184 909 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 OAZ2O95190 189 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 IPO7O95373 1038 aaKnown RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 LCA5LO95447 670 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 TYMPP19971 482 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 MCM3P25205 808 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 PNPLA4P41247 253 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 DLG4P78352 724 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 RBP5P82980 135 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 MAN2A1Q16706 1144 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 LONRF2Q1L5Z9 754 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 SV2CQ496J9 727 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 SLC8B1Q6J4K2 584 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 ANKRD54Q6NXT1 300 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 WDR93Q6P2C0 686 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-206ENST00000537925 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 ASB2Q96Q27 587 aa12.31□□□□□ -0.44
SNHG1-206ENST00000537925 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 ARHGEF37A1IGU5 675 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 H7C4K7 107 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 TGM5O43548 720 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 GLUD1P00367 558 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 CST3P01034 146 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-206ENST00000537925 CYP11A1P05108 521 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 KRT19P08727 400 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 ODC1P11926 461 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 HOXB8P17481 243 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-206ENST00000537925 OR1D2P34982 312 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 MTIF2P46199 727 aaKnown RBP12.3□□□□□ -0.44
SNHG1-206ENST00000537925 AP3M2P53677 418 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 YWHAHQ04917 246 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-206ENST00000537925 RAB33AQ14088 237 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 VWA3BQ502W6 1294 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 C1orf220Q5T0J3 134 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 SYCE2Q6PIF2 218 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 INTS8Q75QN2 995 aaKnown RBP12.3□□□□□ -0.44
SNHG1-206ENST00000537925 PALB2Q86YC2 1186 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 GLYCTKQ8IVS8 523 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 RUBCNQ92622 972 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 EEF2KMTQ96G04 330 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 CD207Q9UJ71 328 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 TIMM13Q9Y5L4 95 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-206ENST00000537925 CDY1Q9Y6F8 540 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 NOTCH4Q99466 2003 aa12.3□□□□□ -0.44
SNHG1-206ENST00000537925 TTC28Q96AY4 2481 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 TARSL2A2RTX5 802 aaKnown RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 CYB561D2O14569 222 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 SASH3O75995 380 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 BMP1P13497 986 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 KCNQ1P51787 676 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 VAMP7P51809 220 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 VAV2P52735 878 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 ITIH3Q06033 890 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 BFSP1Q12934 665 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 GPS2Q13227 327 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 BEND6Q5SZJ8 279 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 ZNF280DQ6N043 979 aa12.29□□□□□ -0.44
SNHG1-206ENST00000537925 ZNF771Q7L3S4 317 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-206ENST00000537925 HDXQ7Z353 690 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms