RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 SMG5Q9UPR3 1016 aaKnown RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 GTPBP10A4D1E9 387 aaKnown RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 YDJCA8MPS7 323 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 PHF20L1A8MW92 1017 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 PRRG1O14668 218 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 MAP3K7O43318 606 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 ZNF200P98182 395 aaPredicted RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 NT5DC1Q5TFE4 455 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 GRAMD1AQ96CP6 724 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 GLIS2Q9BZE0 524 aaPredicted RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 TRPC7Q9HCX4 862 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 MARCOQ9UEW3 520 aaPredicted RBP10.53□□□□□ -0.72
GGA3-201ENST00000537686 ANGPTL2Q9UKU9 493 aa10.53□□□□□ -0.72
GGA3-201ENST00000537686 CXCL8P10145 99 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 GFAPP14136 432 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 RGS2P41220 211 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 SEC24CP53992 1094 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 PCSK7Q16549 785 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 TMEM119Q4V9L6 283 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 SPATA21Q7Z572 469 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 CHSY1Q86X52 802 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 DCP1BQ8IZD4 617 aaKnown RBP10.52□□□□□ -0.72
GGA3-201ENST00000537686 EMC1Q8N766 993 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 EFHBQ8N7U6 833 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 ZNF507Q8TCN5 953 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 TRAPPC12Q8WVT3 735 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 TATDN2Q93075 761 aa10.52□□□□□ -0.72
GGA3-201ENST00000537686 PRMT1Q99873 361 aaKnown RBP10.52□□□□□ -0.72
GGA3-201ENST00000537686 NOP53Q9NZM5 478 aaKnown RBP10.52□□□□□ -0.72
GGA3-201ENST00000537686 PSMC3IPQ9P2W1 217 aaPredicted RBP10.52□□□□□ -0.72
GGA3-201ENST00000537686 TMEM120BA0PK00 339 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 C17orf102A2RUQ5 167 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 ADM5C9JUS6 153 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 M0QYT0 321 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 KIF3CO14782 793 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 FGRP09769 529 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 ERFP50548 548 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 FKBP1AP62942 108 aaKnown RBP10.52□□□□□ -0.73
GGA3-201ENST00000537686 MTHFD1LQ6UB35 978 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 RNF180Q86T96 592 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 PIP4K2CQ8TBX8 421 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 FBXO25Q8TCJ0 367 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 ELMO3Q96BJ8 720 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 FAM161BQ96MY7 647 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 SLITRK1Q96PX8 696 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 AFF4Q9UHB7 1163 aaKnown RBP10.52□□□□□ -0.73
GGA3-201ENST00000537686 PPP2R3BQ9Y5P8 575 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 FAM47DPA6NHR8 397 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 CXCL11O14625 94 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 AP1G2O75843 785 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 CYP2C8P10632 490 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 FNTAP49354 379 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 CENPCQ03188 943 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 LAMTOR4Q0VGL1 99 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 IMPG1Q17R60 797 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 IL31Q6EBC2 164 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 LRIG3Q6UXM1 1119 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 ZNF669Q96BR6 464 aaPredicted RBP10.52□□□□□ -0.73
GGA3-201ENST00000537686 SGSM3Q96HU1 749 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 CCDC138Q96M89 665 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 WWP1Q9H0M0 922 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 SETD4Q9NVD3 440 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 TRIM33Q9UPN9 1127 aa10.52□□□□□ -0.73
GGA3-201ENST00000537686 MYO9BQ13459 2157 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 VDRP11473 427 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 LSP1P33241 339 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 KCNA1Q09470 495 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 UGP2Q16851 508 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 PAPD7Q5XG87 772 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 IPMKQ8NFU5 416 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 SLC5A5Q92911 643 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 XPO6Q96QU8 1125 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 PCMTD2Q9NV79 361 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 ORC6Q9Y5N6 252 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 CHUKO15111 745 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 SMIM24O75264 130 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 EEF1B2P24534 225 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 PTPN11Q06124 597 aaPredicted RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 PTK7Q13308 1070 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 USP10Q14694 798 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 ANO4Q32M45 955 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 TTC23LQ6PF05 361 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 HNRNPLLQ8WVV9 542 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 PTPRN2Q92932 1015 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 CPB2Q96IY4 423 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 MRIQ9BWK5 157 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.51□□□□□ -0.73
GGA3-201ENST00000537686 ADA2Q9NZK5 511 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 DNAJC6O75061 913 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 ZNF286BP0CG31 522 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 PRLRP16471 622 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 IRAK1P51617 712 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 SREBF2Q12772 1141 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms