RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 FAM78AQ5JUQ0 283 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 GAREM2Q75VX8 874 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PARD3BQ8TEW8 1205 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 GTPBP4Q9BZE4 634 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PCDHB5Q9Y5E4 795 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CACNA1IQ9P0X4 2223 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 COL4A2P08572 1712 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 MYH10P35580 1976 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 MYO15AQ9UKN7 3530 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PI15O43692 258 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 NR3C1P04150 777 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 AOC1P19801 751 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 LHX1P48742 406 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 TCF15Q12870 199 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 NFE2Q16621 373 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 CCDC183Q5T5S1 534 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 ELSPBP1Q96BH3 223 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 PRRX2Q99811 253 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 ARHGEF3Q9NR81 526 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 TRAF3IP3Q9Y228 551 aa19.15■□□□□ 0.66
TNFRSF1A-209ENST00000536717 LRRIQ3A6PVS8 624 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CLDN10P78369 228 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NHLH1Q02575 133 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 STXBP5Q5T5C0 1151 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ITIH5Q86UX2 942 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SMARCD2Q92925 531 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PI4K2AQ9BTU6 479 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ZFP14Q9HCL3 533 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MAN1B1Q9UKM7 699 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GTF3C4Q9UKN8 822 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MAPK8IP1Q9UQF2 711 aa19.14■□□□□ 0.65
TNFRSF1A-209ENST00000536717 VPS13AQ96RL7 3174 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NCANO14594 1321 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 KIF26AQ9ULI4 1882 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 KIF20AO95235 890 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 LMO2P25791 158 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GABRR2P28476 465 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PCSK1P29120 753 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 VEPH1Q14D04 833 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ZNF658Q5TYW1 1059 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CAVIN1Q6NZI2 390 aaKnown RBP19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TRIML1Q8N9V2 468 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ZSCAN18Q8TBC5 510 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FAM200AQ8TCP9 573 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GIPC2Q8TF65 315 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MKNK1Q9BUB5 465 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 XYLT2Q9H1B5 865 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TBC1D17Q9HA65 648 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 IL21Q9HBE4 155 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NME7Q9Y5B8 376 aa19.13■□□□□ 0.65
TNFRSF1A-209ENST00000536717 DMDP11532 3685 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MYBPHLA2RUH7 354 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ATP2C2O75185 946 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 WARSP23381 471 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GPR15P49685 360 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NUBP1P53384 320 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MYL6P60660 151 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 DLG4P78352 724 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TDRD10Q5VZ19 366 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FAM171BQ6P995 826 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GUF1Q8N442 669 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MMS19Q96T76 1030 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MRPL45Q9BRJ2 306 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GPR88Q9GZN0 384 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ATXN3LQ9H3M9 355 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SLITRK6Q9H5Y7 841 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TRPV4Q9HBA0 871 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TMEM63CQ9P1W3 806 aa19.12■□□□□ 0.65
TNFRSF1A-209ENST00000536717 BIN1O00499 593 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CALUO43852 315 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 C4BPAP04003 597 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CYP2F1P24903 491 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 VIPR2P41587 438 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PTPN5P54829 565 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TRPC3Q13507 836 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NFIL3Q16649 462 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 WDR72Q3MJ13 1102 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ISM2Q6H9L7 571 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PHLDB3Q6NSJ2 640 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 VITQ6UXI7 678 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 STKLD1Q8NE28 680 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SYT15Q9BQS2 421 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ABCB6Q9NP58 842 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CRTAC1Q9NQ79 661 aa19.11■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GALR2O43603 387 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TACC1O75410 805 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 HMGA1P17096 107 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 AP3M2P53677 418 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 STARD6P59095 220 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PSMC1P62191 440 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PFKPQ01813 784 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GRM2Q14416 872 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CFAP221Q4G0U5 840 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SLC44A4Q53GD3 710 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SDHAF4Q5VUM1 108 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SMYD4Q8IYR2 804 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 VRTNQ9H8Y1 702 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CDH9Q9ULB4 789 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms