RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 INVSQ9Y283 1065 aa8.69□□□□□ -1.02
CHFR-211ENST00000535897 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 VWA3AA6NCI4 1184 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 CYB561D2O14569 222 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 FAM13AO94988 1023 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 CYP11A1P05108 521 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 CKMP06732 381 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 HAPLN1P10915 354 aaPredicted RBP8.68□□□□□ -1.02
CHFR-211ENST00000535897 SPINK2P20155 84 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 DDX6P26196 483 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHFR-211ENST00000535897 PRPHP41219 470 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 IFNAR2P48551 515 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 ACOT2P49753 483 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 TAF6P49848 677 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 TOB1P50616 345 aaPredicted RBP8.68□□□□□ -1.02
CHFR-211ENST00000535897 GALK1P51570 392 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 NLRP12P59046 1061 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 SMARCB1Q12824 385 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 DMC1Q14565 340 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 PDGFRLQ15198 375 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 FBXO43Q4G163 708 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 SH3PXD2AQ5TCZ1 1133 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 NAIF1Q69YI7 327 aaPredicted RBP8.68□□□□□ -1.02
CHFR-211ENST00000535897 TXNDC8Q6A555 127 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 MCTP1Q6DN14 999 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 TTC30AQ86WT1 665 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 CD302Q8IX05 232 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 DCP1BQ8IZD4 617 aaKnown RBP8.68□□□□□ -1.02
CHFR-211ENST00000535897 MYCT1Q8N699 235 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 STKLD1Q8NE28 680 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 TSTD1Q8NFU3 115 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 RASSF8Q8NHQ8 419 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 PNMA5Q96PV4 448 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 REEP2Q9BRK0 252 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 TPSD1Q9BZJ3 242 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 FBRSL1Q9HCM7 1045 aaKnown RBP8.68□□□□□ -1.02
CHFR-211ENST00000535897 DPP3Q9NY33 737 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 PCDHB5Q9Y5E4 795 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
CHFR-211ENST00000535897 SPEGQ15772 3267 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 OBSL1O75147 1896 aa8.68□□□□□ -1.02
CHFR-211ENST00000535897 ASPMQ8IZT6 3477 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 A0A0B4J269 797 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 LNP1A1A4G5 178 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 BCLAF3A2AJT9 711 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 PIRO00625 290 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 KHNYNO15037 678 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 FAM189A1O60320 539 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 TBCAO75347 108 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 GJA4P35212 333 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 SCN1AP35498 2009 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 SLC12A3P55017 1021 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 TSPY1Q01534 308 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 COL9A2Q14055 689 aaPredicted RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 MTF1Q14872 753 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 UAP1L1Q3KQV9 507 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 SV2CQ496J9 727 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 USP39Q53GS9 565 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 SDHAF4Q5VUM1 108 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 DENND4CQ5VZ89 1909 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 WSCD1Q658N2 575 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 ADALQ6DHV7 355 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 ANO7Q6IWH7 933 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 LRRTM3Q86VH5 581 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 MON1AQ86VX9 555 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 GPBP1Q86WP2 473 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 CD101Q93033 1021 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 PI4K2AQ9BTU6 479 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 PARVGQ9HBI0 331 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 TMEM9BQ9NQ34 198 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 DUS2Q9NX74 493 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 CPSF3Q9UKF6 684 aaKnown RBP8.67□□□□□ -1.02
CHFR-211ENST00000535897 ODF2LQ9ULJ1 636 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 DERAQ9Y315 318 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 WNT6Q9Y6F9 365 aa8.67□□□□□ -1.02
CHFR-211ENST00000535897 TRAV19A0A0A6YYK7 116 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 ANO9A1A5B4 782 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 KPNA7A9QM74 516 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 TRAK2O60296 914 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 EIF5BO60841 1220 aaKnown RBP8.66□□□□□ -1.02
CHFR-211ENST00000535897 PIGRP01833 764 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 F11P03951 625 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 USP17L7P0C7H9 530 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 CSH1P0DML2 217 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 CSH2P0DML3 217 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 HMGA1P17096 107 aaKnown RBP8.66□□□□□ -1.02
CHFR-211ENST00000535897 SCP2P22307 547 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 DHPSP49366 369 aaPredicted RBP8.66□□□□□ -1.02
CHFR-211ENST00000535897 GPR15P49685 360 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 SEC13P55735 322 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 RPL10AP62906 217 aaKnown RBP8.66□□□□□ -1.02
CHFR-211ENST00000535897 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 NR1H3Q13133 447 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 NFE2Q16621 373 aaPredicted RBP8.66□□□□□ -1.02
CHFR-211ENST00000535897 DDR2Q16832 855 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 C2orf27AQ580R0 203 aa8.66□□□□□ -1.02
CHFR-211ENST00000535897 ARSHQ5FYA8 562 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms