RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GPR88Q9GZN0 384 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 LMBRD1Q9NUN5 540 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 SPATA6Q9NWH7 488 aaPredicted RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DDX43Q9NXZ2 648 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 HSPBP1Q9NZL4 362 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 DLGAP2Q9P1A6 1054 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 HSFX1Q9UBD0 423 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 CFAP45Q9UL16 551 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 L1RE1Q9UN81 338 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 MTF2Q9Y483 593 aaPredicted RBP9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
SFSWAP-202ENST00000535202 PTPRJQ12913 1337 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 PRR23AA6NEV1 266 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF263O14978 683 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CLIC2O15247 247 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 FGF19O95750 216 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 TARSP26639 723 aaKnown RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CDC25CP30307 473 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 GPR15P49685 360 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CYP2J2P51589 502 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CYP4F8P98187 520 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 MYL7Q01449 175 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CUL4BQ13620 913 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 SURF1Q15526 300 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 INTS6LQ5JSJ4 861 aaKnown RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF852Q6ZMS4 543 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 GAREM2Q75VX8 874 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF771Q7L3S4 317 aaPredicted RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 EPM2AIP1Q7L775 607 aaPredicted RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 OSTM1Q86WC4 334 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 C1orf210Q8IVY1 113 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 MFSD6LQ8IWD5 586 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 YAF2Q8IY57 180 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 GRAMD1CQ8IYS0 662 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 ADGRF2Q8IZF7 708 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 RDH13Q8NBN7 331 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 STKLD1Q8NE28 680 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 OR5B17Q8NGF7 314 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF507Q8TCN5 953 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 SCFD1Q8WVM8 642 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 IRF7Q92985 503 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 SYAP1Q96A49 352 aaPredicted RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 RSPRY1Q96DX4 576 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 GCNAQ96QF7 691 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 TRPV4Q9HBA0 871 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 KIAA1586Q9HCI6 787 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 SLC39A2Q9NP94 309 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 TMLHEQ9NVH6 421 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 INTS13Q9NVM9 706 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 SERTAD1Q9UHV2 236 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 SIX4Q9UIU6 781 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 NDRG2Q9UN36 371 aaKnown RBP9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 OBSL1O75147 1896 aa9.17□□□□□ -0.94
SFSWAP-202ENST00000535202 ZNF638Q14966 1978 aaKnown RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 DENND4CQ5VZ89 1909 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 DPYSL4O14531 572 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 NCAM2O15394 837 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 TGFB1I1O43294 461 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 HCRTO43612 131 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 PRPF40AO75400 957 aaKnown RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 SP9P0CG40 484 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 DLATP10515 647 aaKnown RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 TNNI1P19237 187 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 EHHADHQ08426 723 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 SNRNP35Q16560 246 aaKnown RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 NFE2Q16621 373 aaPredicted RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 DUOXA2Q1HG44 320 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 SDHAF4Q5VUM1 108 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 HS2ST1Q7LGA3 356 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 WDR49Q8IV35 697 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 ARID3BQ8IVW6 561 aaPredicted RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 TMEM86AQ8N2M4 240 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 TOP6BLQ8N6T0 577 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 CSGALNACT1Q8TDX6 532 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 HPDLQ96IR7 371 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 CHAMP1Q96JM3 812 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 FNBP1Q96RU3 617 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 ACBD6Q9BR61 282 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 OSBPL6Q9BZF3 934 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 IL21Q9HBE4 155 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 CGNQ9P2M7 1197 aaKnown RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 RCOR1Q9UKL0 485 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 MAGED2Q9UNF1 606 aaPredicted RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 PIAS3Q9Y6X2 628 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 R4GN57 208 aa9.16□□□□□ -0.94
SFSWAP-202ENST00000535202 CACNA1HO95180 2353 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 A0A1B0GVL5 298 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 PVALEFA0A1B0GWK0 134 aa9.15□□□□□ -0.94
SFSWAP-202ENST00000535202 SHISA7A6NL88 538 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms