RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HNRNPH3P31942 346 aaKnown RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 KRT9P35527 623 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 STAT1P42224 750 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 CDH8P55286 799 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 PLCB3Q01970 1234 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 RAB30Q15771 203 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 SCARA5Q6ZMJ2 495 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 UNC93AQ86WB7 457 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 TMEM169Q96HH4 297 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 MRPL45Q9BRJ2 306 aaKnown RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 GPR62Q9BZJ7 368 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 BARX2Q9UMQ3 279 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 A0A1W2PPC1 479 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 C5orf67F2Z3F1 127 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 CILPO75339 1184 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 MYOGP15173 224 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 SOX5P35711 763 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 LHX1P48742 406 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 ZNF132P52740 706 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
SCARB1-204ENST00000535005 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
SCARB1-204ENST00000535005 METTL23Q86XA0 190 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 ADGRF2Q8IZF7 708 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 OR8K1Q8NGG5 319 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
SCARB1-204ENST00000535005 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
SCARB1-204ENST00000535005 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.32
SCARB1-204ENST00000535005 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 A6NNZ2 444 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 TRIM66O15016 1216 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 FGF18O76093 207 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 OAZ2O95190 189 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 CA3P07451 260 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 GTF2A1P52655 376 aaPredicted RBP13.07□□□□□ -0.32
SCARB1-204ENST00000535005 ERVK-21P61565 698 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 TUBB8Q3ZCM7 444 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 FAM171A1Q5VUB5 890 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 OSTM1Q86WC4 334 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 PNKPQ96T60 521 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 VN1R3Q9BXE9 311 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 LZTS1Q9Y250 596 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 PCDHB4Q9Y5E5 795 aa13.07□□□□□ -0.32
SCARB1-204ENST00000535005 EIF3CLB5ME19 914 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 SOD2P04179 222 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 FERP16591 822 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 CD58P19256 250 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 GNL1P36915 607 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 NDST1P52848 882 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 BPIFB4P59827 614 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 SMAD3P84022 425 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TAP1Q03518 808 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 KRT17Q04695 432 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 GOLGA8FQ08AF8 430 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 GOLGA8DPQ0D2H9 430 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 ZNF569Q5MCW4 686 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 RAD9BQ6WBX8 426 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 IRF2BP2Q7Z5L9 587 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 CRYBG2Q8N1P7 616 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 KLHL23Q8NBE8 558 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TGS1Q96RS0 853 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 EIF3CQ99613 913 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 NME7Q9Y5B8 376 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TIMM13Q9Y5L4 95 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 A0A087WUV0 522 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 PAEPP09466 180 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 CCDC172P0C7W6 258 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TKTP29401 623 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 CTNNB1P35222 781 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 PBX2P40425 430 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 PRKCIP41743 596 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 RAD23BP54727 409 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 YWHAHQ04917 246 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 UBE3AQ05086 875 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 CKAP4Q07065 602 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 DNAJC21Q5F1R6 531 aaKnown RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 SFMBT2Q5VUG0 894 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 OVOS1Q6IE37 1185 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TMEM270Q6UE05 265 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms