RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CRIPAKQ8N1N5 446 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CRYBG2Q8N1P7 616 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 UROC1Q96N76 676 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TRIM7Q9C029 511 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 UVRAGQ9P2Y5 699 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TJP2Q9UDY2 1190 aa21.55■■□□□ 1.04
TNFRSF1A-205ENST00000534885 GABRDO14764 452 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 KIF4AO95239 1232 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ITGB8P26012 769 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CXCR5P32302 372 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 GPD2P43304 727 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CCDC142Q17RM4 750 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 GOLGA7BQ2TAP0 167 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 LIN9Q5TKA1 542 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ERICH1Q86X53 443 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CARD6Q9BX69 1037 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TSC2P49815 1807 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ZNF185O15231 689 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CCDC130P13994 396 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ACAT1P24752 427 aaKnown RBP21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PSMC1P62191 440 aaKnown RBP21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 RNASELQ05823 741 aaKnown RBP21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PEX26Q7Z412 305 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 NT5DC3Q86UY8 548 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ABI1Q8IZP0 508 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SYCE1Q8N0S2 351 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CPXM1Q96SM3 734 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ABCB6Q9NP58 842 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DNAJB4Q9UDY4 337 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 LRFN2Q9ULH4 789 aa21.54■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TRIM43BA6NCK2 446 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TMEM110-MUSTN1A8MSY1 372 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ATP2C2O75185 946 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PFKMP08237 780 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CYP4A22Q5TCH4 519 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TTC30AQ86WT1 665 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 COLGALT2Q8IYK4 626 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TRIM43Q96BQ3 446 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CASD1Q96PB1 797 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 OSBPL9Q96SU4 736 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MCOLN1Q9GZU1 580 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PRDM5Q9NQX1 630 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 KANSL3Q9P2N6 904 aa21.53■■□□□ 1.04
TNFRSF1A-205ENST00000534885 SLU7O95391 586 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 GJB6O95452 261 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 CALB1P05937 261 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MAMLD1Q13495 774 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 MESDQ14696 234 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 STILQ15468 1287 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PLEKHA7Q6IQ23 1121 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DCLRE1AQ6PJP8 1040 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 B3GALNT2Q8NCR0 500 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 COG1Q8WTW3 980 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 DDX43Q9NXZ2 648 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ANAPC7Q9UJX3 599 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 FAM163BP0C2L3 166 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PDCLQ13371 301 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TUBB2AQ13885 445 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 PKDCCQ504Y2 493 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 KIAA0319Q5VV43 1072 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ARHGAP17Q68EM7 881 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 C11orf63Q6NUN7 778 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 FAM43BQ6ZT52 329 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TMEM86AQ8N2M4 240 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TNIP3Q96KP6 325 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 TUBB2BQ9BVA1 445 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 HCSTQ9UBK5 93 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 ALG6Q9Y672 507 aa21.52■■□□□ 1.04
TNFRSF1A-205ENST00000534885 OR1G1P47890 313 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 CDR1P51861 262 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 CPNE8Q86YQ8 564 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 RSPH1Q8WYR4 309 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 CAPZA3Q96KX2 299 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 CALR3Q96L12 384 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 FNDC1Q4ZHG4 1894 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 TCRBV5S1A1TA0A578 114 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 TULP2O00295 520 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 ERBB2P04626 1255 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 ODC1P11926 461 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 PRLRP16471 622 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 ADORA2BP29275 332 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 RPS6KA1Q15418 735 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 CNKSR3Q6P9H4 555 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 PARVAQ9NVD7 372 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 AMFRQ9UKV5 643 aa21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 PRG3Q9Y2Y8 225 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF1A-205ENST00000534885 UQCRHLA0A096LP55 91 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 M0QZQ0 153 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 TIMP1P01033 207 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 UQCRHP07919 91 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 TCP1P17987 556 aaKnown RBP21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 TKTP29401 623 aaKnown RBP21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 LHX1P48742 406 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 SLC2A14Q8TDB8 520 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 FAM193BQ96PV7 902 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 MRPL47Q9HD33 250 aaKnown RBP21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 ST7Q9NRC1 585 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 HESX1Q9UBX0 185 aa21.5■■□□□ 1.03
TNFRSF1A-205ENST00000534885 SCINQ9Y6U3 715 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms