RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CNR2P34972 360 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 NUCB2P80303 420 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 SNW1Q13573 536 aaKnown RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 FOXR2Q6PJQ5 311 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 VITQ6UXI7 678 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 MON1AQ86VX9 555 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 MRPS31Q92665 395 aaKnown RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 SPATA32Q96LK8 384 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 CHRDQ9H2X0 955 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 DDX43Q9NXZ2 648 aaKnown RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 SIX4Q9UIU6 781 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 HEPACAM2A8MVW5 462 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 FOXD2O60548 495 aaPredicted RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 F11P03951 625 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 RPL13P26373 211 aaKnown RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 GTF2H1P32780 548 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 GUCY2FP51841 1108 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 TEAD2Q15562 447 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 TRAPPC11Q7Z392 1133 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 SPATA2LQ8IUW3 424 aaPredicted RBP11.14□□□□□ -0.63
CSDE1-217ENST00000534699 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 FAM200AQ8TCP9 573 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 BPIFB1Q8TDL5 484 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 PAGE5Q96GU1 130 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 TTLL2Q9BWV7 592 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 TICRRQ7Z2Z1 1910 aa11.14□□□□□ -0.63
CSDE1-217ENST00000534699 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 ARNTLO00327 626 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 KLRC4O43908 158 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 STX10O60499 249 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 SDHBP21912 280 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 HOXD13P35453 343 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 CCR2P41597 374 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 CCR3P51677 355 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 NLRP12P59046 1061 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 KCNA1Q09470 495 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 MGAT5BQ3V5L5 792 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSDE1-217ENST00000534699 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 PDZD8Q8NEN9 1154 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 MKNK1Q9BUB5 465 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 SMOC2Q9H3U7 446 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 TIMM13Q9Y5L4 95 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-217ENST00000534699 DOCK6Q96HP0 2047 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 TISP43B9A030 160 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 STK25O00506 426 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 LAMTOR5O43504 91 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 GABRR2P28476 465 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 GPR158Q5T848 1215 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 TPRG1Q6ZUI0 275 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 FEZF2Q8TBJ5 459 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 TCEAL4Q96EI5 215 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 ATXN3LQ9H3M9 355 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 ZSCAN32Q9NX65 697 aa11.13□□□□□ -0.63
CSDE1-217ENST00000534699 HOOK1Q9UJC3 728 aaKnown RBP11.13□□□□□ -0.63
CSDE1-217ENST00000534699 FAM170BA6NMN3 283 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 GFRA3O60609 400 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 LILRB5O75023 590 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 USP17L7P0C7H9 530 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SP9P0CG40 484 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SYKP43405 635 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 TNNC1P63316 161 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 NOP14P78316 857 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 FOXK2Q01167 660 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 TRPC3Q13507 836 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 GUF1Q8N442 669 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ATAD1Q8NBU5 361 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ING5Q8WYH8 240 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 TNIP3Q96KP6 325 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SYT15Q9BQS2 421 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 PANK2Q9BZ23 570 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 PLA2G2FQ9BZM2 168 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 MTMR12Q9C0I1 747 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SNX9Q9Y5X1 595 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 CCDC163A0A0D9SF12 145 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 PFKFB1P16118 471 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 HMGA1P17096 107 aaKnown RBP11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ATF6P18850 670 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 ANXA13P27216 316 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 GDI1P31150 447 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SOWAHAQ2M3V2 549 aa11.12□□□□□ -0.63
CSDE1-217ENST00000534699 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms