RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 RDH13Q8NBN7 331 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 PJA1Q8NG27 643 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 KBTBD7Q8WVZ9 684 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 HPDLQ96IR7 371 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 SHDQ96IW2 340 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 CGRRF1Q99675 332 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 GPR88Q9GZN0 384 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
SF3B2-215ENST00000534307 IL21Q9HBE4 155 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 ATP6V1DQ9Y5K8 247 aa15.1■□□□□ 0.01
SF3B2-215ENST00000534307 BAHCC1Q9P281 2608 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 PATJQ8NI35 1801 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
SF3B2-215ENST00000534307 HCRTO43612 131 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 FGF19O95750 216 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 GLULP15104 373 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 ACAT1P24752 427 aaKnown RBP15.09■□□□□ 0.01
SF3B2-215ENST00000534307 VIPR2P41587 438 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 SYKP43405 635 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 PSMD2Q13200 908 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 NFE2Q16621 373 aaPredicted RBP15.09■□□□□ 0.01
SF3B2-215ENST00000534307 CCDC142Q17RM4 750 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 INTS6LQ5JSJ4 861 aaKnown RBP15.09■□□□□ 0.01
SF3B2-215ENST00000534307 DPH6Q7L8W6 267 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 KIAA2013Q8IYS2 634 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 ADGRF2Q8IZF7 708 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 GOLGA5Q8TBA6 731 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 PLEKHO2Q8TD55 490 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 ZNF516Q92618 1163 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 DNASE1L2Q92874 299 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 RSPRY1Q96DX4 576 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 CNTNAP3BQ96NU0 1288 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 CNTNAP3Q9BZ76 1288 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 FOXQ1Q9C009 403 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 KCTD10Q9H3F6 313 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 GOLPH3LQ9H4A5 285 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 ABCB6Q9NP58 842 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 EXOC1Q9NV70 894 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 DMAC2Q9NW81 257 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 DDX43Q9NXZ2 648 aaKnown RBP15.09■□□□□ 0.01
SF3B2-215ENST00000534307 ABI2Q9NYB9 513 aaPredicted RBP15.09■□□□□ 0.01
SF3B2-215ENST00000534307 SIT1Q9Y3P8 196 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 PCDHB5Q9Y5E4 795 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 DENND4CQ5VZ89 1909 aa15.09■□□□□ 0.01
SF3B2-215ENST00000534307 OBSL1O75147 1896 aa15.08■□□□□ 0.01
SF3B2-215ENST00000534307 KANSL1LA0AUZ9 987 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 ARNTLO00327 626 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 CST3P01034 146 aaPredicted RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 DCNP07585 359 aaKnown RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 PRR29P0C7W0 189 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 DLATP10515 647 aaKnown RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 HMGA1P17096 107 aaKnown RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 PSMC3P17980 439 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 GABRR2P28476 465 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 WEE1P30291 646 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 LHX1P48742 406 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 CLDN10P78369 228 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 MYL7Q01449 175 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 TSPY1Q01534 308 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 MYO1EQ12965 1108 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 GRM2Q14416 872 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 PUM1Q14671 1186 aaKnown RBP eCLIP15.08■□□□□ 0
SF3B2-215ENST00000534307 TMEM150AQ86TG1 271 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 SLC9A9Q8IVB4 645 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 DEPDC1BQ8WUY9 529 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 CCDC127Q96BQ5 260 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 TRMT61BQ9BVS5 477 aaKnown RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 TRPV5Q9NQA5 729 aa15.08■□□□□ 0
SF3B2-215ENST00000534307 MTF2Q9Y483 593 aaPredicted RBP15.08■□□□□ 0
SF3B2-215ENST00000534307 PTPRDP23468 1912 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 TICRRQ7Z2Z1 1910 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 STK25O00506 426 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 LRRN2O75325 713 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 STAU1O95793 577 aaKnown RBP15.07■□□□□ 0
SF3B2-215ENST00000534307 RPN1P04843 607 aaKnown RBP15.07■□□□□ 0
SF3B2-215ENST00000534307 TNNI1P19237 187 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 RFX1P22670 979 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 PCSK1P29120 753 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 FCHO2Q0JRZ9 810 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 DPYDQ12882 1025 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 VEPH1Q14D04 833 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 CFAP221Q4G0U5 840 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 FAM171BQ6P995 826 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 MFSD6LQ8IWD5 586 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 ZNF687Q8N1G0 1237 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 GIPC2Q8TF65 315 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 LRRC3BQ96PB8 259 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 FNBP1Q96RU3 617 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 PI4K2AQ9BTU6 479 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 OSBPL6Q9BZF3 934 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 XYLT2Q9H1B5 865 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 SLITRK6Q9H5Y7 841 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 GDPD2Q9HCC8 539 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 LTB4R2Q9NPC1 389 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 HEBP1Q9NRV9 189 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 DLL3Q9NYJ7 618 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 GTF3C4Q9UKN8 822 aa15.07■□□□□ 0
SF3B2-215ENST00000534307 R4GN57 208 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms