RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 DDX23Q9BUQ8 820 aaKnown RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ATXN3LQ9H3M9 355 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ASAH2Q9NR71 780 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 GDAP2Q9NXN4 497 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 HMGXB4Q9UGU5 601 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 R4GN57 208 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 ZNF638Q14966 1978 aaKnown RBP10.35□□□□□ -0.75
SSBP3-215ENST00000533946 PATJQ8NI35 1801 aa10.35□□□□□ -0.75
SSBP3-215ENST00000533946 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 EP300Q09472 2414 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 PRPF40AO75400 957 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ECI2O75521 394 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ZNF202O95125 648 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 LDHAP00338 332 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 F11P03951 625 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 C4BPAP04003 597 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 SYKP43405 635 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ALDH1A3P47895 512 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 EPHB3P54753 998 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 STARD6P59095 220 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ZXDBP98169 803 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 AMPD3Q01432 767 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 POU5F1Q01860 360 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ANGPT1Q15389 498 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 MLF2Q15773 248 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 GPR158Q5T848 1215 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 CYP4A22Q5TCH4 519 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ATL3Q6DD88 541 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ISM2Q6H9L7 571 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 TPRG1Q6ZUI0 275 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 CEP57L1Q8IYX8 460 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ADGRF2Q8IZF7 708 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 LRRC52Q8N7C0 313 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 XXYLT1Q8NBI6 393 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 FAM200AQ8TCP9 573 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 MYLPFQ96A32 169 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ELSPBP1Q96BH3 223 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 TSPAN18Q96SJ8 248 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 CGRRF1Q99675 332 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 RBM12Q9NTZ6 932 aaKnown RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 GDE1Q9NZC3 331 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 ITGA11Q9UKX5 1188 aa10.34□□□□□ -0.75
SSBP3-215ENST00000533946 MAGED2Q9UNF1 606 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-215ENST00000533946 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 FAM170BA6NMN3 283 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 EXOC3O60645 756 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 HUS1O60921 280 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 TRIM49P0CI25 452 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 TRIM49CP0CI26 452 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 TNNI1P19237 187 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 BDNFP23560 247 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PMS1P54277 932 aaKnown RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PTPN5P54829 565 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 NLRP12P59046 1061 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 GAS6Q14393 721 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 UBXN2BQ14CS0 331 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 DUOXA2Q1HG44 320 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 TRIM68Q6AZZ1 485 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 IQCEQ6IPM2 695 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 FAM171BQ6P995 826 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 SCARA5Q6ZMJ2 495 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PAQR9Q6ZVX9 377 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 MTSS1LQ765P7 747 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 METTL23Q86XA0 190 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 WDR49Q8IV35 697 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 FMR1NBQ8N0W7 255 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 MAB21L3Q8N8X9 362 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PJA1Q8NG27 643 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PARD3BQ8TEW8 1205 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 ZNF560Q96MR9 790 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 SYT15Q9BQS2 421 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 B3GNT5Q9BYG0 378 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 SLITRK6Q9H5Y7 841 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 APOBEC3GQ9HC16 384 aaKnown RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 ZFP14Q9HCL3 533 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 EXOC1Q9NV70 894 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 GTSE1Q9NYZ3 720 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 NDRG2Q9UN36 371 aaKnown RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PCDHB5Q9Y5E4 795 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 ZFP37Q9Y6Q3 630 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 GVINP1Q7Z2Y8 2422 aa10.33□□□□□ -0.76
SSBP3-215ENST00000533946 PTPRZ1P23471 2315 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-215ENST00000533946 MYOFQ9NZM1 2061 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 KANSL1LA0AUZ9 987 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 SLC38A8A6NNN8 435 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 AKAP3O75969 853 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 TNNC2P02585 160 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 NR3C1P04150 777 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
SSBP3-215ENST00000533946 ARSAP15289 507 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms