RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NAIF1Q69YI7 327 aaPredicted RBP19.44■□□□□ 0.7
UBXN1-216ENST00000533908 WDR5BQ86VZ2 330 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 DCP1BQ8IZD4 617 aaKnown RBP19.44■□□□□ 0.7
UBXN1-216ENST00000533908 PDCL2Q8N4E4 241 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 C1orf127Q8N9H9 656 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 SAAL1Q96ER3 474 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 CLIC6Q96NY7 704 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 PKMYT1Q99640 499 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 FAM213AQ9BRX8 229 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 THG1LQ9NWX6 298 aaKnown RBP19.44■□□□□ 0.7
UBXN1-216ENST00000533908 FBXO2Q9UK22 296 aaPredicted RBP19.44■□□□□ 0.7
UBXN1-216ENST00000533908 L1RE1Q9UN81 338 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 AGAP1Q9UPQ3 857 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 TCHHQ07283 1943 aa19.44■□□□□ 0.7
UBXN1-216ENST00000533908 TPRP12270 2363 aaKnown RBP19.44■□□□□ 0.7
UBXN1-216ENST00000533908 EPG5Q9HCE0 2579 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 HCRTO43612 131 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 PRPF40AO75400 957 aaKnown RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 IL18RAPO95256 599 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 ACAT1P24752 427 aaKnown RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 POLR2BP30876 1174 aaKnown RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 POSTNQ15063 836 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 DDR2Q16832 855 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 FAM173BQ6P4H8 233 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 OSTM1Q86WC4 334 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 NETO1Q8TDF5 533 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 HVCN1Q96D96 273 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 FGFBP2Q9BYJ0 223 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 MRPL44Q9H9J2 332 aaKnown RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 TDP1Q9NUW8 608 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 MAGED2Q9UNF1 606 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-216ENST00000533908 SDK1Q7Z5N4 2213 aa19.43■□□□□ 0.7
UBXN1-216ENST00000533908 ATG2BQ96BY7 2078 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 GOLGA8IPA6NC78 632 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 GOLGA8JA6NMD2 632 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 TULP1O00294 542 aaPredicted RBP19.42■□□□□ 0.7
UBXN1-216ENST00000533908 TRDMT1O14717 391 aaKnown RBP19.42■□□□□ 0.7
UBXN1-216ENST00000533908 TADA3O75528 432 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 ITGB3P05106 788 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 CYP2F1P24903 491 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 TFAMQ00059 246 aaKnown RBP19.42■□□□□ 0.7
UBXN1-216ENST00000533908 CEP68Q76N32 757 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 MON1AQ86VX9 555 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 NT5DC4Q86YG4 428 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 SLC22A12Q96S37 553 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 RALGAPA1Q6GYQ0 2036 aa19.42■□□□□ 0.7
UBXN1-216ENST00000533908 OBSL1O75147 1896 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 ACACBO00763 2458 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 AXIN1O15169 862 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 KRT37O76014 449 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 EGFP01133 1207 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 ADRB1P08588 477 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 AVPR1AP37288 418 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 GALK1P51570 392 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 CCDC6Q16204 474 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 L1TD1Q5T7N2 865 aaKnown RBP19.41■□□□□ 0.7
UBXN1-216ENST00000533908 BRSK2Q8IWQ3 736 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 EZH1Q92800 747 aaPredicted RBP19.41■□□□□ 0.7
UBXN1-216ENST00000533908 ACCSQ96QU6 501 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 CYP2S1Q96SQ9 504 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 ACBD6Q9BR61 282 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 RXFP3Q9NSD7 469 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 DDX43Q9NXZ2 648 aaKnown RBP19.41■□□□□ 0.7
UBXN1-216ENST00000533908 STK17AQ9UEE5 414 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 SIX4Q9UIU6 781 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 GTF3C4Q9UKN8 822 aa19.41■□□□□ 0.7
UBXN1-216ENST00000533908 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
UBXN1-216ENST00000533908 KMT2BQ9UMN6 2715 aaPredicted RBP19.4■□□□□ 0.7
UBXN1-216ENST00000533908 A0A087X0B3 334 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 CSH1P0DML2 217 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 CSH2P0DML3 217 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 PNPLA4P41247 253 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 TSPY1Q01534 308 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 BFSP1Q12934 665 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 SF3A2Q15428 464 aaKnown RBP19.4■□□□□ 0.7
UBXN1-216ENST00000533908 NFE2Q16621 373 aaPredicted RBP19.4■□□□□ 0.7
UBXN1-216ENST00000533908 PPM1JQ5JR12 505 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 RRAGBQ5VZM2 374 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 KBTBD6Q86V97 674 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 CSGALNACT2Q8N6G5 542 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 LEO1Q8WVC0 666 aaPredicted RBP19.4■□□□□ 0.7
UBXN1-216ENST00000533908 GAB3Q8WWW8 586 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 MYRFLQ96LU7 910 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 ZNF560Q96MR9 790 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 CBWD1Q9BRT8 395 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 PANK2Q9BZ23 570 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 ARRDC1-AS1Q9H2J1 176 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 PDE11AQ9HCR9 933 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 SEL1LQ9UBV2 794 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 CCDC39Q9UFE4 941 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 ZMYM5Q9UJ78 669 aa19.4■□□□□ 0.7
UBXN1-216ENST00000533908 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-216ENST00000533908 NOL4O94818 638 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 GCNT3O95395 438 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 GAP43P17677 238 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 DDX6P26196 483 aaKnown RBP eCLIP19.39■□□□□ 0.69
UBXN1-216ENST00000533908 GRSF1Q12849 480 aaKnown RBP eCLIP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms