RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TNFSF9P41273 254 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 PTP4A2Q12974 167 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 EMC2Q15006 297 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 MSS51Q4VC12 460 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 PRAMEF18Q5VWM3 479 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 SNRNP48Q6IEG0 339 aaKnown RBP20.34■□□□□ 0.85
CAPN1-226ENST00000533820 VSIG10LQ86VR7 867 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 LONP2Q86WA8 852 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 IP6K2Q9UHH9 426 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 SCINQ9Y6U3 715 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 DOCK5Q9H7D0 1870 aa20.34■□□□□ 0.85
CAPN1-226ENST00000533820 MYH9P35579 1960 aaKnown RBP20.34■□□□□ 0.85
CAPN1-226ENST00000533820 ZC3H11AO75152 810 aaKnown RBP eCLIP20.33■□□□□ 0.85
CAPN1-226ENST00000533820 CCND2P30279 289 aa20.33■□□□□ 0.85
CAPN1-226ENST00000533820 ARHGAP22Q7Z5H3 698 aa20.33■□□□□ 0.85
CAPN1-226ENST00000533820 ALLCQ8N6M5 410 aa20.33■□□□□ 0.85
CAPN1-226ENST00000533820 CCDC97Q96F63 343 aaPredicted RBP20.33■□□□□ 0.85
CAPN1-226ENST00000533820 GMLQ99445 158 aa20.33■□□□□ 0.85
CAPN1-226ENST00000533820 TXLNGQ9NUQ3 528 aa20.33■□□□□ 0.85
CAPN1-226ENST00000533820 USH1CQ9Y6N9 552 aa20.33■□□□□ 0.85
CAPN1-226ENST00000533820 PEX10O60683 326 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 PSAPP07602 524 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 SESN3P58005 492 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 BBS9Q3SYG4 887 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 TAF1BQ53T94 588 aaPredicted RBP20.33■□□□□ 0.84
CAPN1-226ENST00000533820 EAPPQ56P03 285 aaPredicted RBP20.33■□□□□ 0.84
CAPN1-226ENST00000533820 RHPN2Q8IUC4 686 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 RCOR2Q8IZ40 523 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 DENND1AQ8TEH3 1009 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 PCDHGA4Q9Y5G9 962 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 MAP3K13O43283 966 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 CCNB1P14635 433 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 GM2AP17900 193 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 OSTNP61366 133 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 TAF11Q15544 211 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 OTOAQ7RTW8 1153 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 MTDHQ86UE4 582 aaKnown RBP20.33■□□□□ 0.84
CAPN1-226ENST00000533820 MFN1Q8IWA4 741 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 SUPT20HQ8NEM7 779 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 TTC8Q8TAM2 541 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 SLC9A2Q9UBY0 812 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 PCSK1NQ9UHG2 260 aa20.33■□□□□ 0.84
CAPN1-226ENST00000533820 A0A0G2JND7 137 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 ENTPD5O75356 428 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 KCNA2P16389 499 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 ATP4AP20648 1035 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 HIRAP54198 1017 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-226ENST00000533820 MAPK6Q16659 721 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 CENPUQ71F23 418 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 CDR2LQ86X02 465 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-226ENST00000533820 PYROXD1Q8WU10 500 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 TBC1D10AQ9BXI6 508 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 BLOC1S6Q9UL45 172 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 NUMBLQ9Y6R0 609 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 TMEM191CA6NGB0 347 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 EDF1O60869 148 aaKnown RBP20.32■□□□□ 0.84
CAPN1-226ENST00000533820 RNF8O76064 485 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 TMEM191BP0C7N4 346 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 SETSIPP0DME0 302 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 ERFP50548 548 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 GPX6P59796 221 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 HIF1AQ16665 826 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 FNBP1LQ5T0N5 605 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 GPAT2Q6NUI2 795 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 PHF13Q86YI8 300 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-226ENST00000533820 FAM81AQ8TBF8 368 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 GRAMD1AQ96CP6 724 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 RBM41Q96IZ5 413 aaKnown RBP20.32■□□□□ 0.84
CAPN1-226ENST00000533820 MTMR12Q9C0I1 747 aa20.32■□□□□ 0.84
CAPN1-226ENST00000533820 VWA5AO00534 786 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 MMP8P22894 467 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 ALDH3A1P30838 453 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 LMNB2Q03252 620 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 C3orf62Q6ZUJ4 267 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 EMC1Q8N766 993 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 FAM13CQ8NE31 585 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 ACTL9Q8TC94 416 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 ZNF75CPQ92670 426 aaPredicted RBP20.31■□□□□ 0.84
CAPN1-226ENST00000533820 TRIM4Q9C037 500 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 RMI1Q9H9A7 625 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 SLC17A7Q9P2U7 560 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 STARD13Q9Y3M8 1113 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 TCRBV7S3A2A0A539 114 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 C2orf71A6NGG8 1288 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 T-ENOLP0DO92 83 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 GLRA2P23416 452 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 RAD23BP54727 409 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 VCPP55072 806 aaKnown RBP20.31■□□□□ 0.84
CAPN1-226ENST00000533820 MYL6P60660 151 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 MOGSQ13724 837 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 PDK4Q16654 411 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 PLEKHG4Q58EX7 1191 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 RNASEH2BQ5TBB1 312 aaKnown RBP20.31■□□□□ 0.84
CAPN1-226ENST00000533820 RAB3IPQ96QF0 476 aaPredicted RBP20.31■□□□□ 0.84
CAPN1-226ENST00000533820 ACTL7BQ9Y614 415 aa20.31■□□□□ 0.84
CAPN1-226ENST00000533820 CD48P09326 243 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 CD19P15391 556 aa20.3■□□□□ 0.84
CAPN1-226ENST00000533820 OTUD4Q01804 1114 aaKnown RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 ROR2Q01974 943 aaKnown RBP20.3■□□□□ 0.84
CAPN1-226ENST00000533820 SP2Q02086 613 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms