RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SHCBP1LQ9BZQ2 653 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 ATP9AO75110 1047 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 MRPS35P82673 323 aaKnown RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 TSPY1Q01534 308 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 RCN1Q15293 331 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 FSD1LQ9BXM9 530 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 IDI2Q9BXS1 227 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 APOBEC2Q9Y235 224 aaKnown RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 ARIH1Q9Y4X5 557 aaPredicted RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 DCCP43146 1447 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 APOL1O14791 398 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 P4HA2O15460 535 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 PIGHQ14442 188 aaPredicted RBP12.8□□□□□ -0.36
BDNF-218ENST00000533246 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 ACOT1Q86TX2 421 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 ZSWIM2Q8NEG5 633 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 NT5C1AQ9BXI3 368 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 LRFN2Q9ULH4 789 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 POLIQ9UNA4 740 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 GAKO14976 1311 aa12.8□□□□□ -0.36
BDNF-218ENST00000533246 FAM47DPA6NHR8 397 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 ASB14A6NK59 587 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 ITGB5P18084 799 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 ATXN3P54252 364 aaPredicted RBP12.79□□□□□ -0.36
BDNF-218ENST00000533246 IL1RL1Q01638 556 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 NR1H3Q13133 447 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 PGM5Q15124 567 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 BAP1Q92560 729 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 GPRASP2Q96D09 838 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 CDC42EP4Q9H3Q1 356 aaKnown RBP12.79□□□□□ -0.36
BDNF-218ENST00000533246 BCAS3Q9H6U6 928 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 LOC100653049A0A140TA62 436 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 KRT34O76011 436 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
BDNF-218ENST00000533246 TM4SF1P30408 202 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 IFI35P80217 286 aaPredicted RBP12.79□□□□□ -0.36
BDNF-218ENST00000533246 CCDC15Q0P6D6 951 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 EFHC2Q5JST6 749 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 C1orf146Q5VVC0 180 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 IER5Q5VY09 327 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 LRIG3Q6UXM1 1119 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 C1orf186Q6ZWK4 172 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
BDNF-218ENST00000533246 SCFD2Q8WU76 684 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 CISHQ9NSE2 258 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 GTSE1Q9NYZ3 720 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 ARL2BPQ9Y2Y0 163 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 OGTO15294 1046 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 ATP4AP20648 1035 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 RAD23BP54727 409 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 TRPM8Q7Z2W7 1104 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 NT5DC3Q86UY8 548 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 ACTRT1Q8TDG2 376 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.79□□□□□ -0.36
BDNF-218ENST00000533246 PCMTD2Q9NV79 361 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 SLC12A6Q9UHW9 1150 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 C15orf41Q9Y2V0 281 aa12.79□□□□□ -0.36
BDNF-218ENST00000533246 SUPT20HL2P0C7V6 817 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 RARAP10276 462 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 KRT4P19013 534 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 MARCKSL1P49006 195 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 LVRNQ6Q4G3 990 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 FASTKD5Q7L8L6 764 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 C4orf19Q8IY42 314 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 FBXO41Q8TF61 875 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 KCNMB3Q9NPA1 279 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ERAP1Q9NZ08 941 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 PRRC2BQ5JSZ5 2229 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 DFFAO00273 331 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ZNF263O14978 683 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 S100BP04271 92 aaPredicted RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 CXCL8P10145 99 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 CYP2C9P11712 490 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 MLH1P40692 756 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 DRP2Q13474 957 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 NPY5RQ15761 445 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 MAP3K21Q5TCX8 1036 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 VPS39Q96JC1 886 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 IPO11Q9UI26 975 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 CNTRLQ7Z7A1 2325 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 NEMP1O14524 444 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 HMBSP08397 361 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 AP3M2P53677 418 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ACCSLQ4AC99 568 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 C1QTNF12Q5T7M4 302 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ACTL9Q8TC94 416 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms