RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PTPRJQ12913 1337 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 SOBPA7XYQ1 873 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 CLIC2O15247 247 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 FAM163BP0C2L3 166 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 RPS9P46781 194 aaKnown RBP25.16■■□□□ 1.62
SMPD1-209ENST00000533196 RPL10AP62906 217 aaKnown RBP25.16■■□□□ 1.62
SMPD1-209ENST00000533196 CYP24A1Q07973 514 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 FCHO2Q0JRZ9 810 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 SOWAHAQ2M3V2 549 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 GPR158Q5T848 1215 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 C1orf228Q6PIY5 440 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 TRAPPC11Q7Z392 1133 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 ARID3BQ8IVW6 561 aaPredicted RBP25.16■■□□□ 1.62
SMPD1-209ENST00000533196 YAF2Q8IY57 180 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 CLDN23Q96B33 292 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 MSANTD3Q96H12 275 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 FUBP3Q96I24 572 aaKnown RBP eCLIP25.16■■□□□ 1.62
SMPD1-209ENST00000533196 FAM84AQ96KN4 292 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 PKMYT1Q99640 499 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 CGRRF1Q99675 332 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 MKNK1Q9BUB5 465 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 SEMA4AQ9H3S1 761 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 TMLHEQ9NVH6 421 aa25.16■■□□□ 1.62
SMPD1-209ENST00000533196 PATJQ8NI35 1801 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 DPYSL4O14531 572 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 CHADO15335 359 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 KLRC4O43908 158 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 CSH1P0DML2 217 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 CSH2P0DML3 217 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 PFKFB1P16118 471 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 TNNI1P19237 187 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 CYP2J2P51589 502 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 CFAP221Q4G0U5 840 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 SCARA3Q6AZY7 606 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 FRMD5Q7Z6J6 570 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 RDH13Q8NBN7 331 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 TMEM174Q8WUU8 243 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 SCAND2PQ9GZW5 306 aaPredicted RBP25.15■■□□□ 1.62
SMPD1-209ENST00000533196 HPSEQ9Y251 543 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 ZDHHC9Q9Y397 364 aa25.15■■□□□ 1.62
SMPD1-209ENST00000533196 ZNF638Q14966 1978 aaKnown RBP25.14■■□□□ 1.62
SMPD1-209ENST00000533196 COL4A3Q01955 1670 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 FAM237AA0A1B0GTK4 181 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 A0A1B0GVL5 298 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 PRR23AA6NEV1 266 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 LRRN2O75325 713 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 DLATP10515 647 aaKnown RBP25.14■■□□□ 1.62
SMPD1-209ENST00000533196 DDX6P26196 483 aaKnown RBP eCLIP25.14■■□□□ 1.62
SMPD1-209ENST00000533196 STXBP5Q5T5C0 1151 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 OSTM1Q86WC4 334 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 GIPC2Q8TF65 315 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 PI4K2AQ9BTU6 479 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 EXOC1Q9NV70 894 aa25.14■■□□□ 1.62
SMPD1-209ENST00000533196 UXTQ9UBK9 157 aaPredicted RBP25.14■■□□□ 1.62
SMPD1-209ENST00000533196 MTF2Q9Y483 593 aaPredicted RBP25.14■■□□□ 1.62
SMPD1-209ENST00000533196 OBSL1O75147 1896 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 ARNTLO00327 626 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 HMGA1P17096 107 aaKnown RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 CD72P21854 359 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 WARSP23381 471 aaKnown RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 ACAT1P24752 427 aaKnown RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 TARSP26639 723 aaKnown RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 MAPRE1Q15691 268 aaKnown RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 ARHGAP29Q52LW3 1261 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 FAM171BQ6P995 826 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 ZC3H14Q6PJT7 736 aaKnown RBP25.13■■□□□ 1.61
SMPD1-209ENST00000533196 GRAMD1CQ8IYS0 662 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 CSGALNACT1Q8TDX6 532 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 RSPRY1Q96DX4 576 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 GTF3C4Q9UKN8 822 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 FBXO4Q9UKT5 387 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 CDH9Q9ULB4 789 aa25.13■■□□□ 1.61
SMPD1-209ENST00000533196 NCANO14594 1321 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 SHISA7A6NL88 538 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 EXOC3O60645 756 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 STAU1O95793 577 aaKnown RBP25.12■■□□□ 1.61
SMPD1-209ENST00000533196 MAGEA11P43364 429 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 AP3M2P53677 418 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 STK4Q13043 487 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 ZNF528Q3MIS6 628 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 C4orf50Q6ZRC1 276 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 SPATA2LQ8IUW3 424 aaPredicted RBP25.12■■□□□ 1.61
SMPD1-209ENST00000533196 KBTBD7Q8WVZ9 684 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 CCDC127Q96BQ5 260 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 IER2Q9BTL4 223 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 SPATA6Q9NWH7 488 aaPredicted RBP25.12■■□□□ 1.61
SMPD1-209ENST00000533196 PIAS3Q9Y6X2 628 aa25.12■■□□□ 1.61
SMPD1-209ENST00000533196 SP9P0CG40 484 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 SYKP43405 635 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 NLRP12P59046 1061 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 CYP4F8P98187 520 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 PLCB2Q00722 1185 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 KMT5BQ4FZB7 885 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 ASCL5Q7RTU5 278 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 SLC9A9Q8IVB4 645 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 KIAA0895Q8NCT3 520 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 FAM3CQ92520 227 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 TRMT2BQ96GJ1 504 aaKnown RBP25.11■■□□□ 1.61
SMPD1-209ENST00000533196 MYRFLQ96LU7 910 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms