RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 THAP12O43422 761 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 SPOPO43791 374 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 STRNO43815 780 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 B4GALT4O60513 344 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 VNN1O95497 513 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 ASS1P00966 412 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 PRKCBP05771 671 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 CALB1P05937 261 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 MMEP08473 750 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 HOXC6P09630 235 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NUDT17P0C025 328 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 HOXD8P13378 290 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 CAPN2P17655 700 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TNNI1P19237 187 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 COMTP21964 271 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NOS2P35228 1153 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 PTPN7P35236 360 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NSFP46459 744 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 LMAN1P49257 510 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NLRP11P59045 1033 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NOMO3P69849 1222 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 DR1Q01658 176 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 MOGSQ13724 837 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 HLTFQ14527 1009 aaKnown RBP eCLIP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TTLL4Q14679 1199 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 KCTD2Q14681 263 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TEAD4Q15561 434 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 ZSCAN26Q16670 478 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 ZNF484Q5JVG2 852 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 LDLRAD1Q5T700 205 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 LRRC38Q5VT99 294 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 PLEKHA7Q6IQ23 1121 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 KDM7AQ6ZMT4 941 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 GADL1Q6ZQY3 521 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TSHZ1Q6ZSZ6 1077 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 SEPT14Q6ZU15 432 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 CEP128Q6ZU80 1094 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TMC3Q7Z5M5 1100 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NCAPG2Q86XI2 1143 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 NT5DC4Q86YG4 428 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 SLC13A5Q86YT5 568 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 KLHL7Q8IXQ5 586 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 GSPT2Q8IYD1 628 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 MICALL1Q8N3F8 863 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TTC39CQ8N584 583 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TSEN2Q8NCE0 465 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 GRK7Q8WTQ7 553 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 ALG3Q92685 438 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 KAT5Q92993 513 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 FMO2Q99518 471 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 MMP19Q99542 508 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 ACO2Q99798 780 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 SH2D3AQ9BRG2 576 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TMEM109Q9BVC6 243 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TXLNGYQ9BZA5 131 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 DDX47Q9H0S4 455 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 FZD8Q9H461 694 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 GOLPH3Q9H4A6 298 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 VRTNQ9H8Y1 702 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 ZCCHC17Q9NP64 241 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 TOPORSQ9NS56 1045 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 PRMT7Q9NVM4 692 aaPredicted RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 CNOT8Q9UFF9 292 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 MTRF1LQ9UGC7 380 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 AMACRQ9UHK6 382 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 CPSF3Q9UKF6 684 aaKnown RBP6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 CITO14578 2027 aa6.08□□□□□ -1.44
ATPAF1-210ENST00000532925 PASKQ96RG2 1323 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 IQCA1LA6NCM1 817 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 ZBTB42B2RXF5 422 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 H0YGN5 161 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 MYO1FO00160 1098 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 TTI1O43156 1089 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 PPFIA4O75335 1185 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 PROSCO94903 275 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 SKIP12755 728 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 KRT5P13647 590 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 NID1P14543 1247 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 EIF4BP23588 611 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 GNA15P30679 374 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 MAPK4P31152 587 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 HSD17B3P37058 310 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 USP8P40818 1118 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 CETN2P41208 172 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 DNA2P51530 1060 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 EPHA4P54764 986 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 FKBP1BP68106 108 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 CAV1Q03135 178 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 TNFAIP2Q03169 654 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 LAMTOR4Q0VGL1 99 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 SNAPC2Q13487 334 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 NCOA4Q13772 614 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 SLMAPQ14BN4 828 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 PLCB4Q15147 1175 aa6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 PCBP1Q15365 356 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 SIX1Q15475 284 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-210ENST00000532925 DUOXA2Q1HG44 320 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms