RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 RAB20Q9NX57 234 aa21.23■□□□□ 0.99
CPSF1-209ENST00000532725 ABI2Q9NYB9 513 aaPredicted RBP21.23■□□□□ 0.99
CPSF1-209ENST00000532725 LIMD1Q9UGP4 676 aa21.23■□□□□ 0.99
CPSF1-209ENST00000532725 FGFR1OPO95684 399 aaKnown RBP21.22■□□□□ 0.99
CPSF1-209ENST00000532725 P4HA1P13674 534 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 ASPAP45381 313 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 RAP1GAPP47736 663 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 EPHB3P54753 998 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 PLD1Q13393 1074 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 MGAT5BQ3V5L5 792 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 IQCEQ6IPM2 695 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 ELMOD1Q8N336 334 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 TDRD5Q8NAT2 981 aaKnown RBP21.22■□□□□ 0.99
CPSF1-209ENST00000532725 ITFG1Q8TB96 612 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 CORO1BQ9BR76 489 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 LRRC3Q9BY71 257 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 BCO2Q9BYV7 579 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 ABCB6Q9NP58 842 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 ASB3Q9Y575 518 aa21.22■□□□□ 0.99
CPSF1-209ENST00000532725 MYO10Q9HD67 2058 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 A8MXQ7 604 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 PMM2O15305 246 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 LAMP2P13473 410 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 PTPN1P18031 435 aaKnown RBP21.21■□□□□ 0.99
CPSF1-209ENST00000532725 CYP2F1P24903 491 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 ERCC5P28715 1186 aaPredicted RBP21.21■□□□□ 0.99
CPSF1-209ENST00000532725 EPHA5P54756 1037 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 PSMC1P62191 440 aaKnown RBP21.21■□□□□ 0.99
CPSF1-209ENST00000532725 NOP14P78316 857 aaKnown RBP21.21■□□□□ 0.99
CPSF1-209ENST00000532725 SLC5A9Q2M3M2 681 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 CFAP221Q4G0U5 840 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 PRSS36Q5K4E3 855 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 SCARA5Q6ZMJ2 495 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 DNAJB7Q7Z6W7 309 aaPredicted RBP21.21■□□□□ 0.99
CPSF1-209ENST00000532725 IRF2BP1Q8IU81 584 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 TRIM59Q8IWR1 403 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 HS6ST3Q8IZP7 471 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 MYCBPAPQ8TBZ2 947 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 SEPT5Q99719 369 aaPredicted RBP21.21■□□□□ 0.99
CPSF1-209ENST00000532725 LPIN3Q9BQK8 851 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 IMPG2Q9BZV3 1241 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 DPEP3Q9H4B8 488 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 EPS15L1Q9UBC2 864 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 DENND4AQ7Z401 1863 aa21.21■□□□□ 0.99
CPSF1-209ENST00000532725 PI4K2BG5E9Z4 385 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 CLSTN1O94985 981 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 ATF6P18850 670 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 GBP2P32456 591 aaPredicted RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 FMO5P49326 533 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 MAPRE1Q15691 268 aaKnown RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 CT47A1Q5JQC4 288 aaPredicted RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 POTEHQ6S545 545 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 GET4Q7L5D6 327 aaPredicted RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 FGF13Q92913 245 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 TATDN2Q93075 761 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 PSMG2Q969U7 264 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 FUBP3Q96I24 572 aaKnown RBP eCLIP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 FAXDC2Q96IV6 333 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 CYP3A43Q9HB55 503 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 MAGEC2Q9UBF1 373 aaPredicted RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 MUTYHQ9UIF7 546 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 CDH7Q9ULB5 785 aa21.2■□□□□ 0.98
CPSF1-209ENST00000532725 MRPS23Q9Y3D9 190 aaKnown RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 ZFP37Q9Y6Q3 630 aaPredicted RBP21.2■□□□□ 0.98
CPSF1-209ENST00000532725 MICAL2O94851 1124 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 CCR2P41597 374 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 CYP4A22Q5TCH4 519 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 C4orf50Q6ZRC1 276 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 SPATA2LQ8IUW3 424 aaPredicted RBP21.19■□□□□ 0.98
CPSF1-209ENST00000532725 CRYBG2Q8N1P7 616 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 CCDC150Q8NCX0 1101 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 TCEAL4Q96EI5 215 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 PCED1BQ96HM7 432 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 NIF3L1Q9GZT8 377 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 EPHX3Q9H6B9 360 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 DACH1Q9UI36 760 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 DOCK8Q8NF50 2099 aa21.19■□□□□ 0.98
CPSF1-209ENST00000532725 NRG2O14511 850 aaPredicted RBP21.18■□□□□ 0.98
CPSF1-209ENST00000532725 ZNF197O14709 1029 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 MOSPD3O75425 235 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 CCDC192P0DO97 292 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 MAGEA11P43364 429 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 GPR15P49685 360 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 NDST1P52848 882 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 KCNH2Q12809 1159 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 MDH1BQ5I0G3 518 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 WDR44Q5JSH3 913 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 CCDC183Q5T5S1 534 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 PDZD4Q76G19 769 aaPredicted RBP21.18■□□□□ 0.98
CPSF1-209ENST00000532725 ITIH5Q86UX2 942 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 UNC93AQ86WB7 457 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 TMC8Q8IU68 726 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 LEMD2Q8NC56 503 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 B3GALNT2Q8NCR0 500 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 GIPC2Q8TF65 315 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 MYLPFQ96A32 169 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 ASAH2Q9NR71 780 aa21.18■□□□□ 0.98
CPSF1-209ENST00000532725 P4HA2O15460 535 aa21.17■□□□□ 0.98
CPSF1-209ENST00000532725 DCXO43602 365 aa21.17■□□□□ 0.98
CPSF1-209ENST00000532725 ASGR2P07307 311 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms