RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 TRPV4Q9HBA0 871 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 DMAC2Q9NW81 257 aa18.47■□□□□ 0.55
PHRF1-204ENST00000532550 KANSL1LA0AUZ9 987 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 CALUO43852 315 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-204ENST00000532550 RHOBTB3O94955 611 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 PRR29P0C7W0 189 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 CDC25CP30307 473 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 AP3M2P53677 418 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 RPL10AP62906 217 aaKnown RBP18.46■□□□□ 0.55
PHRF1-204ENST00000532550 WDR72Q3MJ13 1102 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 GPR158Q5T848 1215 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 LIMS2Q7Z4I7 341 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 MFSD6LQ8IWD5 586 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 CCDC105Q8IYK2 499 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 TMEM174Q8WUU8 243 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 DEPDC1BQ8WUY9 529 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 IRF7Q92985 503 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 ABCB6Q9NP58 842 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 CDH9Q9ULB4 789 aa18.46■□□□□ 0.55
PHRF1-204ENST00000532550 MYBPHLA2RUH7 354 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 HEPACAM2A8MVW5 462 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 DPYSL4O14531 572 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 ZNF263O14978 683 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 NR3C1P04150 777 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 DCNP07585 359 aaKnown RBP18.45■□□□□ 0.54
PHRF1-204ENST00000532550 PDGFRBP09619 1106 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 FAM163BP0C2L3 166 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 CSH1P0DML2 217 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 CSH2P0DML3 217 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 WARSP23381 471 aaKnown RBP18.45■□□□□ 0.54
PHRF1-204ENST00000532550 CYP2F1P24903 491 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 LMO2P25791 158 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 GDI1P31150 447 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 ATICP31939 592 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 GNL1P36915 607 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-204ENST00000532550 CASP4P49662 377 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 TNNC1P63316 161 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 BIRC3Q13489 604 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 MAPRE1Q15691 268 aaKnown RBP18.45■□□□□ 0.54
PHRF1-204ENST00000532550 STXBP5Q5T5C0 1151 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 VITQ6UXI7 678 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 C4orf50Q6ZRC1 276 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 GPIHBP1Q8IV16 184 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 ARID3BQ8IVW6 561 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-204ENST00000532550 YAF2Q8IY57 180 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 PARD3BQ8TEW8 1205 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 KBTBD7Q8WVZ9 684 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 DNASE1L2Q92874 299 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 SYT15Q9BQS2 421 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 FOXQ1Q9C009 403 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 SNX25Q9H3E2 840 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 MAGEC2Q9UBF1 373 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-204ENST00000532550 FRMD4BQ9Y2L6 1034 aa18.45■□□□□ 0.54
PHRF1-204ENST00000532550 HCRTO43612 131 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 MRE11P49959 708 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 MYL6P60660 151 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 KCNB1Q14721 858 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 DDR2Q16832 855 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 CEP135Q66GS9 1140 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 FAM171BQ6P995 826 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 PJA1Q8NG27 643 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 OR6B3Q8NGW1 331 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 SYAP1Q96A49 352 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-204ENST00000532550 FUBP3Q96I24 572 aaKnown RBP eCLIP18.44■□□□□ 0.54
PHRF1-204ENST00000532550 NELL2Q99435 816 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 PKMYT1Q99640 499 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 DDX23Q9BUQ8 820 aaKnown RBP18.44■□□□□ 0.54
PHRF1-204ENST00000532550 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-204ENST00000532550 TASP1Q9H6P5 420 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 HEBP1Q9NRV9 189 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 FAM86C1Q9NVL1 165 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 NXF1Q9UBU9 619 aaKnown RBP18.44■□□□□ 0.54
PHRF1-204ENST00000532550 ZMYM5Q9UJ78 669 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 MAGED2Q9UNF1 606 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-204ENST00000532550 MAPK8IP1Q9UQF2 711 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 TRAF3IP3Q9Y228 551 aa18.44■□□□□ 0.54
PHRF1-204ENST00000532550 FAM170BA6NMN3 283 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 LRRIQ3A6PVS8 624 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-204ENST00000532550 ATP2C2O75185 946 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 TACC1O75410 805 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 CLSTN1O94985 981 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 STAU1O95793 577 aaKnown RBP18.43■□□□□ 0.54
PHRF1-204ENST00000532550 CD72P21854 359 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 GPR15P49685 360 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 CLDN10P78369 228 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 CYP4F8P98187 520 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 UBXN2BQ14CS0 331 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 SDHAF4Q5VUM1 108 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 ZNF852Q6ZMS4 543 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 TPRG1Q6ZUI0 275 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 SCN4BQ8IWT1 228 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 PLEKHO2Q8TD55 490 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 PHOX2BQ99453 314 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 MRPL45Q9BRJ2 306 aaKnown RBP18.43■□□□□ 0.54
PHRF1-204ENST00000532550 OSBPL6Q9BZF3 934 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 IL21Q9HBE4 155 aa18.43■□□□□ 0.54
PHRF1-204ENST00000532550 MRPS17Q9Y2R5 130 aaKnown RBP18.43■□□□□ 0.54
PHRF1-204ENST00000532550 F5P12259 2224 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms