RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SLC20A1Q8WUM9 679 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ZNF296Q8WUU4 475 aaPredicted RBP16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ZNF112Q9UJU3 913 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 TSPAN16Q9UKR8 245 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 PRR23AA6NEV1 266 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 GMNNO75496 209 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 KRT14P02533 472 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 BDNFP23560 247 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 LRRC8DQ7L1W4 858 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 DDI1Q8WTU0 396 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.49■□□□□ 0.239e-7■■■□□ 15.8
PPFIA1-222ENST00000532504 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 UMODL1Q5DID0 1318 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 MAP2K2P36507 400 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 VEGFBP49765 207 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 PRAMEP78395 509 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 LLGL2Q6P1M3 1020 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 RAD9BQ6WBX8 426 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 EMC1Q8N766 993 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 EFHBQ8N7U6 833 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ENDOD1O94919 500 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 PCSK7Q16549 785 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ITIH5Q86UX2 942 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 RCOR2Q8IZ40 523 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC28A3Q9HAS3 691 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 PADI3Q9ULW8 664 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 MAP3K6O95382 1288 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 CCND3P30281 292 aaPredicted RBP16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 DLG4P78352 724 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 FAM131BQ86XD5 332 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 CATSPERBQ9H7T0 1116 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 BFARQ9NZS9 450 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 FIS1Q9Y3D6 152 aa16.49■□□□□ 0.23
PPFIA1-222ENST00000532504 UNCXA6NJT0 531 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 RRP9O43818 475 aaKnown RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 CCL5P13501 91 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 DNAAF5Q86Y56 855 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 CCDC33Q8N5R6 958 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 FAM84AQ96KN4 292 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 MMTAG2Q9BU76 263 aaKnown RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 A0A1W2PQJ5 194 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ESYT3A0FGR9 886 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 NDUFAB1O14561 156 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ASMTLO95671 621 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 FGBP02675 491 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 MT-ND3P03897 115 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ACRP10323 421 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 SYN1P17600 705 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ACLYP53396 1101 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 BST2Q10589 180 aaKnown RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 VPS39Q96JC1 886 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.232e-8■■■■■ 44.2
PPFIA1-222ENST00000532504 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 GLI3P10071 1580 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 A0A087X0T9 212 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 FAM228BP0C875 321 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 GTF2BQ00403 316 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 ZNF177Q13360 481 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 KCNT1Q5JUK3 1230 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 RAB44Q7Z6P3 723 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC35C1Q96A29 364 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 CCDC130P13994 396 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 EPHB4P54760 987 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 SCLYQ96I15 445 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 GABRQQ9UN88 632 aa16.48■□□□□ 0.23
PPFIA1-222ENST00000532504 SCN11AQ9UI33 1791 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 F5H5T6 163 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 LBX1P52954 281 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 NR1H3Q13133 447 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 DNAJC19Q96DA6 116 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 NUDT5Q9UKK9 219 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 GNRH1P01148 92 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 TMEM253P0C7T8 217 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 DARSP14868 501 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 ARSEP51690 589 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 PLD1Q13393 1074 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 TNFRSF25Q93038 417 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC45A1Q9Y2W3 748 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 ALG6Q9Y672 507 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 UBA6A0AVT1 1052 aaPredicted RBP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 EBAG9O00559 213 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 SLC10A3P09131 477 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 MX2P20592 715 aa16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
PPFIA1-222ENST00000532504 ADIGQ0VDE8 80 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms