RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 SHKBP1Q8TBC3 707 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 KXD1Q9BQD3 176 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 LPIN3Q9BQK8 851 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 SYT15Q9BQS2 421 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 SNX25Q9H3E2 840 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 MFSD1Q9H3U5 465 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 SLC2A4RGQ9NR83 387 aa24.59■■□□□ 1.53
CAPN1-222ENST00000532285 NXF1Q9UBU9 619 aaKnown RBP24.59■■□□□ 1.53
CAPN1-222ENST00000532285 ZDBF2Q9HCK1 2354 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 HCRTO43612 131 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 CFHP08603 1231 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 KRT13P13646 458 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 GJA1P17302 382 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 TEAD2Q15562 447 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 MAPRE1Q15691 268 aaKnown RBP24.58■■□□□ 1.53
CAPN1-222ENST00000532285 TAF12Q16514 161 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 ZACNQ401N2 412 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 CFAP221Q4G0U5 840 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 SPATA2LQ8IUW3 424 aaPredicted RBP24.58■■□□□ 1.53
CAPN1-222ENST00000532285 ELSPBP1Q96BH3 223 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 FUBP3Q96I24 572 aaKnown RBP eCLIP24.58■■□□□ 1.53
CAPN1-222ENST00000532285 ASB16Q96NS5 453 aa24.58■■□□□ 1.53
CAPN1-222ENST00000532285 ZNF334Q9HCZ1 680 aaPredicted RBP24.58■■□□□ 1.53
CAPN1-222ENST00000532285 A0A1W2PRU2 124 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 MYBPHLA2RUH7 354 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 NRG2O14511 850 aaPredicted RBP24.57■■□□□ 1.52
CAPN1-222ENST00000532285 VNN1O95497 513 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 PDGFRBP09619 1106 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 CYP2F1P24903 491 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 RPL10AP62906 217 aaKnown RBP24.57■■□□□ 1.52
CAPN1-222ENST00000532285 SGSM1Q2NKQ1 1148 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 ZNF699Q32M78 642 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 ZNF667Q5HYK9 610 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 FAM78AQ5JUQ0 283 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 C1orf220Q5T0J3 134 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 C4orf50Q6ZRC1 276 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 SV2AQ7L0J3 742 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 SIX5Q8N196 739 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 GIPC2Q8TF65 315 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 SMARCD2Q92925 531 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 ZSWIM3Q96MP5 696 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 TSG101Q99816 390 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 MRPL45Q9BRJ2 306 aaKnown RBP24.57■■□□□ 1.52
CAPN1-222ENST00000532285 KCNH6Q9H252 994 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 ZFP14Q9HCL3 533 aa24.57■■□□□ 1.52
CAPN1-222ENST00000532285 NUP210Q8TEM1 1887 aaPredicted RBP24.57■■□□□ 1.52
CAPN1-222ENST00000532285 OBSL1O75147 1896 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 CETN3O15182 167 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 ATP2C2O75185 946 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 CLSTN1O94985 981 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 GPC5P78333 572 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 TANGO2Q6ICL3 276 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 GAREM2Q75VX8 874 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 OR6B3Q8NGW1 331 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 GPR152Q8TDT2 470 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 TAF4BQ92750 862 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 MKNK1Q9BUB5 465 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 SLITRK6Q9H5Y7 841 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 GREB1Q4ZG55 1949 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 WDFY4Q6ZS81 3184 aa24.56■■□□□ 1.52
CAPN1-222ENST00000532285 ZNF638Q14966 1978 aaKnown RBP24.55■■□□□ 1.52
CAPN1-222ENST00000532285 P4HA1P13674 534 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 GABRR2P28476 465 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 AVPR2P30518 371 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 MAGEA11P43364 429 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 MCCD1P59942 119 aaPredicted RBP24.55■■□□□ 1.52
CAPN1-222ENST00000532285 PSMC1P62191 440 aaKnown RBP24.55■■□□□ 1.52
CAPN1-222ENST00000532285 UBE2HP62256 183 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 STIM1Q13586 685 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 ARHGAP15Q53QZ3 475 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 ADSSL1Q8N142 457 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 ZSCAN18Q8TBC5 510 aaPredicted RBP24.55■■□□□ 1.52
CAPN1-222ENST00000532285 ATXN3LQ9H3M9 355 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 TRPV4Q9HBA0 871 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 CRTAC1Q9NQ79 661 aa24.55■■□□□ 1.52
CAPN1-222ENST00000532285 MAGEC2Q9UBF1 373 aaPredicted RBP24.55■■□□□ 1.52
CAPN1-222ENST00000532285 CSH1P0DML2 217 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 CSH2P0DML3 217 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 EPB41P11171 864 aaKnown RBP24.54■■□□□ 1.52
CAPN1-222ENST00000532285 FCARP24071 287 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 CDC25CP30307 473 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 CCDC142Q17RM4 750 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 ASTLQ6HA08 431 aaPredicted RBP24.54■■□□□ 1.52
CAPN1-222ENST00000532285 MYCBPAPQ8TBZ2 947 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 GCNAQ96QF7 691 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 PLA2G2FQ9BZM2 168 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 MAN1B1Q9UKM7 699 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 CA14Q9ULX7 337 aa24.54■■□□□ 1.52
CAPN1-222ENST00000532285 KRBA1A5PL33 1030 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 A8MXQ7 604 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 HLA-DRAP01903 254 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 TRIM49P0CI25 452 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 TRIM49CP0CI26 452 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 PPP1R2P41236 205 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 PIK3CAP42336 1068 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 GPR15P49685 360 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 CLCN5P51795 746 aa24.53■■□□□ 1.52
CAPN1-222ENST00000532285 VCPP55072 806 aaKnown RBP24.53■■□□□ 1.52
CAPN1-222ENST00000532285 FKBP3Q00688 224 aaKnown RBP24.53■■□□□ 1.52
CAPN1-222ENST00000532285 PFKPQ01813 784 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms