RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 TAF12Q16514 161 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 ARHGAP29Q52LW3 1261 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 CRELD2Q6UXH1 353 aaPredicted RBP16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 CCDC73Q6ZRK6 1079 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 DCP1BQ8IZD4 617 aaKnown RBP16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 DCLK2Q8N568 766 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 DNAJC19Q96DA6 116 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 RMDN1Q96DB5 314 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 LPIN3Q9BQK8 851 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 FAM213AQ9BRX8 229 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 MKNK1Q9BUB5 465 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 STRA6Q9BX79 667 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 LMAN1LQ9HAT1 526 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 OLFML3Q9NRN5 406 aa16.39■□□□□ 0.21
DEPDC7-204ENST00000532078 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 GCNT3O95395 438 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 TDGF1P13385 188 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 SYT1P21579 422 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 WEE1P30291 646 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 STAT6P42226 847 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 BRSK2Q8IWQ3 736 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 GPR161Q8N6U8 529 aaKnown RBP16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 CLIC6Q96NY7 704 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 TASP1Q9H6P5 420 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 ABI2Q9NYB9 513 aaPredicted RBP16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 ZMYM5Q9UJ78 669 aa16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 MORC2Q9Y6X9 1032 aaPredicted RBP16.38■□□□□ 0.21
DEPDC7-204ENST00000532078 PRAMEF12O95522 483 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 LDHAP00338 332 aaKnown RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 HAPLN1P10915 354 aaPredicted RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 CHRNB1P11230 501 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 IDEP14735 1019 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 GARTP22102 1010 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 CYP4F8P98187 520 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 TFAMQ00059 246 aaKnown RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 TSPY1Q01534 308 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 KCNA1Q09470 495 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 PUM1Q14671 1186 aaKnown RBP eCLIP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 RALGPS2Q86X27 583 aaPredicted RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 SYCP3Q8IZU3 236 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 RBAKQ9NYW8 714 aaPredicted RBP16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 PCDHB5Q9Y5E4 795 aa16.37■□□□□ 0.21
DEPDC7-204ENST00000532078 MYBPHLA2RUH7 354 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 SPECC1L-ADORA2AF8WAN1 911 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 POLR2BP30876 1174 aaKnown RBP16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 CTHP32929 405 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 SOX9P48436 509 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 NFE2Q16621 373 aaPredicted RBP16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 DGLUCYQ7Z3D6 616 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 LRRTM3Q86VH5 581 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 SPEM1Q8N4L4 309 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 LRRC52Q8N7C0 313 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 BPIFB1Q8TDL5 484 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 GIPC2Q8TF65 315 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 SAAL1Q96ER3 474 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 IL21Q9HBE4 155 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 THG1LQ9NWX6 298 aaKnown RBP16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 RAB23Q9ULC3 237 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 ADGRG1Q9Y653 693 aa16.36■□□□□ 0.21
DEPDC7-204ENST00000532078 KIF26AQ9ULI4 1882 aaPredicted RBP16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 HUS1O60921 280 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 ITGB3P05106 788 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 DDX6P26196 483 aaKnown RBP eCLIP16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 CXCL12P48061 93 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 CDR1P51861 262 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 CASP5P51878 434 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 SLC39A14Q15043 492 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 DGKKQ5KSL6 1271 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 TMEM86AQ8N2M4 240 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 PDCL2Q8N4E4 241 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 CELF5Q8N6W0 485 aaKnown RBP16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 C1orf127Q8N9H9 656 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 LEO1Q8WVC0 666 aaPredicted RBP16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 ZFYVE19Q96K21 471 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 LRRC3BQ96PB8 259 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 PANK4Q9NVE7 773 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 GMEB2Q9UKD1 530 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 AGAP1Q9UPQ3 857 aa16.35■□□□□ 0.21
DEPDC7-204ENST00000532078 EXTL3O43909 919 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 PAPSS2O95340 614 aaPredicted RBP16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 AVPR1AP37288 418 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 WNT7BP56706 349 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 MYL7Q01449 175 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 SATB1Q01826 763 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 BFSP1Q12934 665 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 ITPRIPL2Q3MIP1 535 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 TXNDC11Q6PKC3 985 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 STXBP4Q6ZWJ1 553 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 CCDC65Q8IXS2 484 aa16.34■□□□□ 0.21
DEPDC7-204ENST00000532078 CMTM8Q8IZV2 173 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms