RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 F11P03951 625 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 TDGF1P13385 188 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 CTHP32929 405 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 HOXD13P35453 343 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 CCR3P51677 355 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 NLRP12P59046 1061 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 PLCB2Q00722 1185 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 AMPD3Q01432 767 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 LRRC32Q14392 662 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 PPP2R5DQ14738 602 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 INTS6LQ5JSJ4 861 aaKnown RBP18.08■□□□□ 0.48
CPSF1-207ENST00000531727 CNNM4Q6P4Q7 775 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 TMEM150AQ86TG1 271 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 RALGPS2Q86X27 583 aaPredicted RBP18.08■□□□□ 0.48
CPSF1-207ENST00000531727 ADGRF2Q8IZF7 708 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 CMTM8Q8IZV2 173 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 DCLK2Q8N568 766 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 CELF5Q8N6W0 485 aaKnown RBP18.08■□□□□ 0.48
CPSF1-207ENST00000531727 SNX21Q969T3 373 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 PKMYT1Q99640 499 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 SLC46A2Q9BY10 475 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 ABCB6Q9NP58 842 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 GTSE1Q9NYZ3 720 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 SNX9Q9Y5X1 595 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 WDR87Q6ZQQ6 2873 aa18.08■□□□□ 0.48
CPSF1-207ENST00000531727 DCHS1Q96JQ0 3298 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 PTPRJQ12913 1337 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 ZNF233A6NK53 670 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 EIF3DO15371 548 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 CSH1P0DML2 217 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 CSH2P0DML3 217 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 ACAT1P24752 427 aaKnown RBP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 DDX6P26196 483 aaKnown RBP eCLIP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 GPR15P49685 360 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 NRLP54845 237 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 RPL10AP62906 217 aaKnown RBP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 ASIC1P78348 528 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 SURF1Q15526 300 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 LMBRD2Q68DH5 695 aaPredicted RBP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 TXNDC11Q6PKC3 985 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 SHC4Q6S5L8 630 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 OSTM1Q86WC4 334 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 CBWD2Q8IUF1 395 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 TOP6BLQ8N6T0 577 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 IQUBQ8NA54 791 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 SMG9Q9H0W8 520 aaKnown RBP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 INTS13Q9NVM9 706 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 THG1LQ9NWX6 298 aaKnown RBP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 HSPBP1Q9NZL4 362 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 SMG5Q9UPR3 1016 aaKnown RBP18.07■□□□□ 0.48
CPSF1-207ENST00000531727 GVINP1Q7Z2Y8 2422 aa18.07■□□□□ 0.48
CPSF1-207ENST00000531727 DMXL1Q9Y485 3027 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 SOBPA7XYQ1 873 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 GABRDO14764 452 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 TNNC2P02585 160 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 CYP2F1P24903 491 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 PCSK1P29120 753 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 LHX1P48742 406 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 MYO1EQ12965 1108 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 GAS6Q14393 721 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 DUOXA2Q1HG44 320 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 SOWAHAQ2M3V2 549 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 EPM2AIP1Q7L775 607 aaPredicted RBP18.06■□□□□ 0.48
CPSF1-207ENST00000531727 ERMP1Q7Z2K6 904 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 SPEM1Q8N4L4 309 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 OR5B17Q8NGF7 314 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 TTC8Q8TAM2 541 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 ZNF507Q8TCN5 953 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 C7orf25Q9BPX7 421 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 KIAA1586Q9HCI6 787 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 NCDNQ9UBB6 729 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
CPSF1-207ENST00000531727 MAGED2Q9UNF1 606 aaPredicted RBP18.06■□□□□ 0.48
CPSF1-207ENST00000531727 R3HCC1Q9Y3T6 440 aaKnown RBP18.06■□□□□ 0.48
CPSF1-207ENST00000531727 NOL4O94818 638 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 AVPR1AP37288 418 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 CXCL12P48061 93 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 SATB1Q01826 763 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 TNK2Q07912 1038 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 DDR2Q16832 855 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 CFAP221Q4G0U5 840 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 WDR44Q5JSH3 913 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 DGKKQ5KSL6 1271 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 SDHAF4Q5VUM1 108 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
CPSF1-207ENST00000531727 DPH6Q7L8W6 267 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 LIMS2Q7Z4I7 341 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 MAB21L3Q8N8X9 362 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 STKLD1Q8NE28 680 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 FOXD4L4Q8WXT5 416 aaPredicted RBP18.05■□□□□ 0.48
CPSF1-207ENST00000531727 MRPS31Q92665 395 aaKnown RBP18.05■□□□□ 0.48
CPSF1-207ENST00000531727 TRMT2BQ96GJ1 504 aaKnown RBP18.05■□□□□ 0.48
CPSF1-207ENST00000531727 HPDLQ96IR7 371 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 MAGEF1Q9HAY2 307 aa18.05■□□□□ 0.48
CPSF1-207ENST00000531727 RBM12Q9NTZ6 932 aaKnown RBP18.05■□□□□ 0.48
CPSF1-207ENST00000531727 UXTQ9UBK9 157 aaPredicted RBP18.05■□□□□ 0.48
CPSF1-207ENST00000531727 F5P12259 2224 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 SPTBN4Q9H254 2564 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms