RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 SECISBP2LQ93073 1101 aaKnown RBP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 FUBP3Q96I24 572 aaKnown RBP eCLIP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CEP295NLQ96MC4 621 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 PANK2Q9BZ23 570 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 KIF9Q9HAQ2 790 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 ABI2Q9NYB9 513 aaPredicted RBP14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 DLL3Q9NYJ7 618 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 L1RE1Q9UN81 338 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 CEP250Q9BV73 2442 aa14.33□□□□□ -0.12
AMBRA1-210ENST00000531542 SCN1AP35498 2009 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 TSC2P49815 1807 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 NOL4O94818 638 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 PRAMEF12O95522 483 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 FAM163BP0C2L3 166 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 CNR2P34972 360 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 RPL10AP62906 217 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 MYL7Q01449 175 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 CCINQ13939 588 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 GAS6Q14393 721 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 ZNF268Q14587 947 aaPredicted RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 PUM1Q14671 1186 aaKnown RBP eCLIP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 STK38Q15208 465 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 TSSK4Q6SA08 328 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 EPM2AIP1Q7L775 607 aaPredicted RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 ZNF507Q8TCN5 953 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 SNX21Q969T3 373 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 FAM83CQ9BQN1 747 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 FGFBP2Q9BYJ0 223 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 TRIM9Q9C026 710 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 PDE11AQ9HCR9 933 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 INTS13Q9NVM9 706 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 DDX43Q9NXZ2 648 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 UXTQ9UBK9 157 aaPredicted RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 SIX4Q9UIU6 781 aa14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 SMG5Q9UPR3 1016 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-210ENST00000531542 ANK1P16157 1881 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 DMXL1Q9Y485 3027 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 ZNF233A6NK53 670 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 SLC38A8A6NNN8 435 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 CUTAO60888 179 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 PRPF40AO75400 957 aaKnown RBP14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 SDHBP21912 280 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 PCSK1P29120 753 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 AVPR1AP37288 418 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 CYP4F8P98187 520 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 MYO1EQ12965 1108 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 SOWAHAQ2M3V2 549 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 ITPRIPL2Q3MIP1 535 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 FAM171BQ6P995 826 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 TXNDC11Q6PKC3 985 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 DCLK2Q8N568 766 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 PDILTQ8N807 584 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 RMDN1Q96DB5 314 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 C7orf25Q9BPX7 421 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 HINFPQ9BQA5 517 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 TDP1Q9NUW8 608 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 GTSE1Q9NYZ3 720 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 NCDNQ9UBB6 729 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
AMBRA1-210ENST00000531542 GOLGA8IPA6NC78 632 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 GOLGA8JA6NMD2 632 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 TMEM191BP0C7N4 346 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 HOXD13P35453 343 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 MAGEA11P43364 429 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 EHHADHQ08426 723 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 MAPRE1Q15691 268 aaKnown RBP14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 WDR44Q5JSH3 913 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 ATL3Q6DD88 541 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 WDR49Q8IV35 697 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 ADGRF2Q8IZF7 708 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 MRPS31Q92665 395 aaKnown RBP14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 USP13Q92995 863 aaPredicted RBP14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 PI4K2AQ9BTU6 479 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 MTMR12Q9C0I1 747 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 PCIF1Q9H4Z3 704 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 HSPBP1Q9NZL4 362 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 UBE4BO95155 1302 aa14.3□□□□□ -0.12
AMBRA1-210ENST00000531542 PRR5-ARHGAP8B1AHC4 643 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 K7ESF4 209 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 TRDMT1O14717 391 aaKnown RBP14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 LRP3O75074 770 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 TNNC2P02585 160 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 KRT19P08727 400 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 PFKLP17858 780 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 TGM1P22735 817 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 CYP2F1P24903 491 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 SOX9P48436 509 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 ARHGAP8P85298 464 aa14.29□□□□□ -0.12
AMBRA1-210ENST00000531542 AMPD2Q01433 879 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms