RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 MAP4K4O95819 1239 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 HNRNPCP07910 306 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD44-231ENST00000531110 U2AF1L5P0DN76 240 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 TNNT1P13805 278 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 ZFXP17010 805 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 ATP5JP18859 108 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 DDCP20711 480 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 CCNCP24863 283 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 ALDH1A3P47895 512 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 GCLCP48506 637 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 SH3BGRP55822 239 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 U2AF1Q01081 240 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD44-231ENST00000531110 ZXDCQ2QGD7 858 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 UAP1L1Q3KQV9 507 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 THEMIS2Q5TEJ8 643 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 CCDC70Q6NSX1 233 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 C1orf210Q8IVY1 113 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 WDR63Q8IWG1 891 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 CCDC65Q8IXS2 484 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 MAML1Q92585 1016 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 ARHGAP45Q92619 1136 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 PPP2R3CQ969Q6 453 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 LRRC45Q96CN5 670 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 ERO1AQ96HE7 468 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 MRGPRX4Q96LA9 322 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 SCLT1Q96NL6 688 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 AIFM3Q96NN9 605 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 EIF3CQ99613 913 aaKnown RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 NDC1Q9BTX1 674 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 MRI1Q9BV20 369 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 LRRCC1Q9C099 1032 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 RPAP3Q9H6T3 665 aaPredicted RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 ZMAT5Q9UDW3 170 aaKnown RBP6.19□□□□□ -1.42
CD44-231ENST00000531110 TTLL3Q9Y4R7 772 aa6.19□□□□□ -1.42
CD44-231ENST00000531110 ERICH4A6NGS2 130 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 TRIM64CA6NLI5 447 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 KIF3BO15066 747 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 PLSCR1O15162 318 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 ARIH2O95376 493 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 IL33O95760 270 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 AMHP03971 560 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 MYL1P05976 194 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 POU2F2P09086 479 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 ALAS1P13196 640 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 CYP11B2P19099 503 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 TRIM21P19474 475 aaKnown RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 GPTP24298 496 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 PCSK1P29120 753 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 FNTAP49354 379 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 CLK1P49759 484 aaKnown RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 CCT8P50990 548 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 TARDBPQ13148 414 aaKnown RBP eCLIP6.18□□□□□ -1.42
CD44-231ENST00000531110 EIF4A2Q14240 407 aaKnown RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 E2F5Q15329 346 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 CCDC57Q2TAC2 916 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 C3orf36Q3SXR2 165 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 USH1GQ495M9 461 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 RABL3Q5HYI8 236 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 SPDYCQ5MJ68 293 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 ATXN7L2Q5T6C5 722 aaPredicted RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 ANKS6Q68DC2 871 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 USP45Q70EL2 814 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 XYLT1Q86Y38 959 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 HSCBQ8IWL3 235 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 ATP11CQ8NB49 1132 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 CCDC150Q8NCX0 1101 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 OR10H5Q8NGA6 315 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 SLC35B2Q8TB61 432 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 IFI44Q8TCB0 444 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 KIAA1524Q8TCG1 905 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 CCHCR1Q8TD31 782 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 SH3RF3Q8TEJ3 882 aaPredicted RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 TRPC4APQ8TEL6 797 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 CACTINQ8WUQ7 758 aaKnown RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 EXTL1Q92935 676 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 ZNF503Q96F45 646 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 GSDMAQ96QA5 445 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 PAGR1Q9BTK6 254 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 BRD8Q9H0E9 1235 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 MAN1C1Q9NR34 630 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 ARGLU1Q9NWB6 273 aaPredicted RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 C6orf203Q9P0P8 240 aaPredicted RBP6.18□□□□□ -1.42
CD44-231ENST00000531110 RABL2BQ9UNT1 228 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 TMED5Q9Y3A6 229 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 SQORQ9Y6N5 450 aa6.18□□□□□ -1.42
CD44-231ENST00000531110 GAGE12BA1L429 117 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 CCDC162PA2VCL2 907 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 TTI1O43156 1089 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 MTA2O94776 668 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 IGHDP01880 384 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 H2AFXP16104 143 aaPredicted RBP6.17□□□□□ -1.42
CD44-231ENST00000531110 HK1P19367 917 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 TNFRSF1AP19438 455 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 PDCP20941 246 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 IL12RB1P42701 662 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 ROR2Q01974 943 aaKnown RBP6.17□□□□□ -1.42
CD44-231ENST00000531110 FOXE3Q13461 319 aa6.17□□□□□ -1.42
CD44-231ENST00000531110 CSRP2Q16527 193 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms