RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ZNF500O60304 480 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-221ENST00000531068 PHACTR2O75167 634 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 MOSPD3O75425 235 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 RHOBTB3O94955 611 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 TPM3P06753 285 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 CDC25CP30307 473 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 ATICP31939 592 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 STARD6P59095 220 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 RPL10AP62906 217 aaKnown RBP11.77□□□□□ -0.53
CAPN1-221ENST00000531068 KCNB1Q14721 858 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 STX1AQ16623 288 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 SOWAHAQ2M3V2 549 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 DPCR1Q3MIW9 517 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.53
CAPN1-221ENST00000531068 LIMS2Q7Z4I7 341 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 TRIML1Q8N9V2 468 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 SHKBP1Q8TBC3 707 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 DEPDC1BQ8WUY9 529 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 MMS19Q96T76 1030 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 NELL2Q99435 816 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 TRMT61BQ9BVS5 477 aaKnown RBP11.77□□□□□ -0.53
CAPN1-221ENST00000531068 LRRC3Q9BY71 257 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 ATXN3LQ9H3M9 355 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 TBC1D17Q9HA65 648 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 DMAC2Q9NW81 257 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 SIT1Q9Y3P8 196 aa11.77□□□□□ -0.53
CAPN1-221ENST00000531068 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 DPYSL4O14531 572 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 PI15O43692 258 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 SOAT2O75908 522 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 CST3P01034 146 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 CSH1P0DML2 217 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 CSH2P0DML3 217 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 GJA1P17302 382 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 PSMC3P17980 439 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 RPL13P26373 211 aaKnown RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 GNL1P36915 607 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 TNNC1P63316 161 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 TCF15Q12870 199 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 TEAD2Q15562 447 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 MLF2Q15773 248 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 ANO6Q4KMQ2 910 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 CWF19L1Q69YN2 538 aaKnown RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 SASS6Q6UVJ0 657 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 C4orf50Q6ZRC1 276 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 TMC8Q8IU68 726 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 SPATA2LQ8IUW3 424 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 MFSD6LQ8IWD5 586 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 KIAA0895Q8NCT3 520 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 ZSCAN18Q8TBC5 510 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 ATOH1Q92858 354 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 IRF7Q92985 503 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 FUBP3Q96I24 572 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 ZSWIM3Q96MP5 696 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 BPIFA3Q9BQP9 254 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 SNX25Q9H3E2 840 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 KCTD10Q9H3F6 313 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 BRD9Q9H8M2 597 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 ANO10Q9NW15 660 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 HOOK1Q9UJC3 728 aaKnown RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 GTF3C4Q9UKN8 822 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
CAPN1-221ENST00000531068 MRPS17Q9Y2R5 130 aaKnown RBP11.76□□□□□ -0.53
CAPN1-221ENST00000531068 KANSL1LA0AUZ9 987 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 SOBPA7XYQ1 873 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 BIN1O00499 593 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 MAN2B1O00754 1011 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 IKBKBO14920 756 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 ZNF263O14978 683 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 NCAM2O15394 837 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 TACC1O75410 805 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 SMC2O95347 1197 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 NR3C1P04150 777 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 WARSP23381 471 aaKnown RBP11.75□□□□□ -0.53
CAPN1-221ENST00000531068 ACAT1P24752 427 aaKnown RBP11.75□□□□□ -0.53
CAPN1-221ENST00000531068 GABRR2P28476 465 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 WEE1P30291 646 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 TERF1P54274 439 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 CLDN10P78369 228 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 NCAPHQ15003 741 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 WDR72Q3MJ13 1102 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 FAM171BQ6P995 826 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 POTEHQ6S545 545 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 ZNF852Q6ZMS4 543 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 GAREM2Q75VX8 874 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 YAF2Q8IY57 180 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 CCDC105Q8IYK2 499 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 DTWD2Q8NBA8 298 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 PARD3BQ8TEW8 1205 aa11.75□□□□□ -0.53
CAPN1-221ENST00000531068 GIPC2Q8TF65 315 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms