RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 DCUN1D1Q96GG9 259 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 DCAF5Q96JK2 942 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 RBM15Q96T37 977 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPRK-219ENST00000531050 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
PTPRK-219ENST00000531050 C7orf25Q9BPX7 421 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 NMUR2Q9GZQ4 415 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 TRABDQ9H4I3 376 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 RNF41Q9H4P4 317 aaPredicted RBP8.16□□□□□ -1.1
PTPRK-219ENST00000531050 OLFML3Q9NRN5 406 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 HERC5Q9UII4 1024 aaKnown RBP8.16□□□□□ -1.1
PTPRK-219ENST00000531050 GNPTGQ9UJJ9 305 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 INPP5FQ9Y2H2 1132 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 PTPN22Q9Y2R2 807 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 MTO1Q9Y2Z2 717 aaKnown RBP8.16□□□□□ -1.1
PTPRK-219ENST00000531050 SLC30A1Q9Y6M5 507 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 PAPPAQ13219 1627 aa8.16□□□□□ -1.1
PTPRK-219ENST00000531050 A8MU76 341 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 TMX2-CTNND1H3BSU7 103 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 GNPATO15228 680 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 THAP12O43422 761 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A9O60656 530 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PDE8AO60658 829 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 MSL3P1P0C860 447 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A6P19224 532 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A1P22309 533 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A4P22310 534 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 GCAP28676 217 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PRDX6P30041 224 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A3P35503 534 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A5P35504 534 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 TRAPPC10P48553 1259 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 HNRNPFP52597 415 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CTBSQ01459 385 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 FUT2Q10981 343 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 EIF2B5Q13144 721 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 SUZ12Q15022 739 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 EFHC1Q5JVL4 640 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 BTBD8Q5XKL5 378 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ANKRD13DQ6ZTN6 518 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PIK3AP1Q6ZUJ8 805 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 MYO1HQ8N1T3 1032 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 GLIS3Q8NEA6 775 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PDZD8Q8NEN9 1154 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CALML6Q8TD86 181 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 GIMAP1Q8WWP7 306 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PSPC1Q8WXF1 523 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CNBD2Q96M20 576 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CSRNP1Q96S65 589 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ZKSCAN3Q9BRR0 538 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 TRIM55Q9BYV6 548 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 GLT8D2Q9H1C3 349 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A7Q9HAW7 530 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A10Q9HAW8 530 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 UGT1A8Q9HAW9 530 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CDH7Q9ULB5 785 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 SMG5Q9UPR3 1016 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 RABGAP1Q9Y3P9 1069 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 GOLGA8CPA6NN73 597 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 POTECB2RU33 542 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 TYROBPO43914 113 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ENO1P06733 434 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 FAM58BPP0C7Q3 252 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ATF3P18847 181 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 BDNFP23560 247 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ADSLP30566 484 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 COILP38432 576 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ARL4CP56559 192 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ADAM17P78536 824 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ZNF200P98182 395 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CALCOCO2Q13137 446 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 SCARF1Q14162 830 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CHRNA2Q15822 529 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PCSK7Q16549 785 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 Q3C1V9 767 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 DNAL1Q4LDG9 190 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 DPY19L2P1Q6NXN4 242 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CYP2U1Q7Z449 544 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 CADM3Q8N126 398 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 C4orf33Q8N1A6 199 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 SLC26A7Q8TE54 656 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 HSPH1Q92598 858 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 HPS1Q92902 700 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 TAMM41Q96BW9 452 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 OXNAD1Q96HP4 312 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 FAR2Q96K12 515 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PWWP2AQ96N64 755 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PSD2Q9BQI7 771 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 Q9H521 79 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 FKBP14Q9NWM8 211 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 WHRNQ9P202 907 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 ZMAT5Q9UDW3 170 aaKnown RBP8.15□□□□□ -1.1
PTPRK-219ENST00000531050 EBF1Q9UH73 591 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 RABGEF1Q9UJ41 708 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 RAB26Q9ULW5 256 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 PCDHGA8Q9Y5G5 932 aa8.15□□□□□ -1.1
PTPRK-219ENST00000531050 IGSF9BQ9UPX0 1349 aa8.15□□□□□ -1.11
PTPRK-219ENST00000531050 TCRBV7S2A1N4TA0A589 114 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms