RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ZMYM5Q9UJ78 669 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 SNX9Q9Y5X1 595 aa16.97■□□□□ 0.31
CPSF1-205ENST00000531042 MYBPHLA2RUH7 354 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 SPECC1L-ADORA2AF8WAN1 911 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 CUTAO60888 179 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 PRPF40AO75400 957 aaKnown RBP16.96■□□□□ 0.31
CPSF1-205ENST00000531042 TMEM191BP0C7N4 346 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 ACAT1P24752 427 aaKnown RBP16.96■□□□□ 0.31
CPSF1-205ENST00000531042 HOXD13P35453 343 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 GPR15P49685 360 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 NLRP12P59046 1061 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 FOXK2Q01167 660 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 AMPD3Q01432 767 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 MYL7Q01449 175 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 INTS6LQ5JSJ4 861 aaKnown RBP16.96■□□□□ 0.31
CPSF1-205ENST00000531042 SHC4Q6S5L8 630 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 RALGPS2Q86X27 583 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-205ENST00000531042 CMTM8Q8IZV2 173 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 CELF5Q8N6W0 485 aaKnown RBP16.96■□□□□ 0.31
CPSF1-205ENST00000531042 SPATA18Q8TC71 538 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 SNX21Q969T3 373 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 DHX58Q96C10 678 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 PKMYT1Q99640 499 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 EPC1Q9H2F5 836 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 INTS13Q9NVM9 706 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 GTSE1Q9NYZ3 720 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 OBSL1O75147 1896 aa16.96■□□□□ 0.31
CPSF1-205ENST00000531042 KIF26AQ9ULI4 1882 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-205ENST00000531042 PTPRJQ12913 1337 aa16.96■□□□□ 0.3
CPSF1-205ENST00000531042 ZNF233A6NK53 670 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 GABRDO14764 452 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 EIF3DO15371 548 aaKnown RBP eCLIP16.95■□□□□ 0.35e-6■■■□□ 17.2
CPSF1-205ENST00000531042 CSH1P0DML2 217 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 CSH2P0DML3 217 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 CYP2F1P24903 491 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 DDX6P26196 483 aaKnown RBP eCLIP16.95■□□□□ 0.3
CPSF1-205ENST00000531042 CTHP32929 405 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 CCR3P51677 355 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 NRLP54845 237 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 LRRC32Q14392 662 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 GAS6Q14393 721 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 PPP2R5DQ14738 602 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 SURF1Q15526 300 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 WDR44Q5JSH3 913 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 LMBRD2Q68DH5 695 aaPredicted RBP16.95■□□□□ 0.3
CPSF1-205ENST00000531042 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 TXNDC11Q6PKC3 985 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 EPM2AIP1Q7L775 607 aaPredicted RBP16.95■□□□□ 0.3
CPSF1-205ENST00000531042 CBWD2Q8IUF1 395 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 TOP6BLQ8N6T0 577 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 MAB21L3Q8N8X9 362 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 STKLD1Q8NE28 680 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 OR5B17Q8NGF7 314 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 TTC8Q8TAM2 541 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 ZNF507Q8TCN5 953 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 ANKRD36BP1Q96IX9 119 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 SMG9Q9H0W8 520 aaKnown RBP16.95■□□□□ 0.3
CPSF1-205ENST00000531042 ABCB6Q9NP58 842 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 THG1LQ9NWX6 298 aaKnown RBP16.95■□□□□ 0.3
CPSF1-205ENST00000531042 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 GTF3C4Q9UKN8 822 aa16.95■□□□□ 0.3
CPSF1-205ENST00000531042 LHX1P48742 406 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 RPL10AP62906 217 aaKnown RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 ASIC1P78348 528 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 TNK2Q07912 1038 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 MYO1EQ12965 1108 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 DDR2Q16832 855 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 DUOXA2Q1HG44 320 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 SDHAF4Q5VUM1 108 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 DPH6Q7L8W6 267 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 ERMP1Q7Z2K6 904 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 ADGRF2Q8IZF7 708 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 SPEM1Q8N4L4 309 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 C7orf25Q9BPX7 421 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 KIAA1586Q9HCI6 787 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 RBM12Q9NTZ6 932 aaKnown RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 NCDNQ9UBB6 729 aa16.94■□□□□ 0.3
CPSF1-205ENST00000531042 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 R3HCC1Q9Y3T6 440 aaKnown RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 ZNF638Q14966 1978 aaKnown RBP16.94■□□□□ 0.3
CPSF1-205ENST00000531042 SOBPA7XYQ1 873 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 TGFB1I1O43294 461 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 HCRTO43612 131 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 TNNC2P02585 160 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 PCSK1P29120 753 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 AVPR1AP37288 418 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 CXCL12P48061 93 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 SATB1Q01826 763 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 PON2Q15165 354 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 ITPRIPL2Q3MIP1 535 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 CFAP221Q4G0U5 840 aa16.93■□□□□ 0.3
CPSF1-205ENST00000531042 DGKKQ5KSL6 1271 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms