RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DDX3YO15523 660 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 CYP26A1O43174 497 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 MSCO60682 206 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 RPS6KA5O75582 802 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CNMDO75829 334 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 IL18RAPO95256 599 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 SGPL1O95470 568 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 HLA-DRAP01903 254 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 C4BPAP04003 597 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 CLTAP09496 248 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 DLATP10515 647 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 CETPP11597 493 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CHRNB2P17787 502 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 TNNI1P19237 187 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 ABCB4P21439 1286 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 EPHX2P34913 555 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CTNNA1P35221 906 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 HSPA9P38646 679 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 USP8P40818 1118 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CETN2P41208 172 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 NSFP46459 744 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 FNTAP49354 379 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 EIF3BP55884 814 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 FMO1Q01740 532 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 GUCY2DQ02846 1103 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 TNFAIP2Q03169 654 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 TAP1Q03518 808 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 BIRC3Q13489 604 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CUL2Q13617 745 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CAPSQ13938 189 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 PCBP1Q15365 356 aaKnown RBP eCLIP5.93□□□□□ -1.46
PCF11-205ENST00000530906 CYP1B1Q16678 543 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 FAM187BQ17R55 369 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 EMC10Q5UCC4 262 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CCDC62Q6P9F0 684 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 PRR23CQ6ZRP0 262 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 TSHZ1Q6ZSZ6 1077 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
PCF11-205ENST00000530906 ZNF771Q7L3S4 317 aaPredicted RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 APBB1IPQ7Z5R6 666 aaPredicted RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 NOP9Q86U38 636 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 NT5DC4Q86YG4 428 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 C12orf50Q8NA57 414 aaPredicted RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 ZNF564Q8TBZ8 553 aaPredicted RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 ASAP3Q8TDY4 903 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 SLC20A1Q8WUM9 679 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 DDX1Q92499 740 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 SEMA4DQ92854 862 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 GLG1Q92896 1179 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 SLCO2A1Q92959 643 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CD101Q93033 1021 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 ZNF653Q96CK0 615 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 PSMB7Q99436 277 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 PCYT2Q99447 389 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 KRT12Q99456 494 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 GPR20Q99678 358 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 KIFC3Q9BVG8 833 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 CCDC113Q9H0I3 377 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 ELP3Q9H9T3 547 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 EPB41L5Q9HCM4 733 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 ERAP1Q9NZ08 941 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 MORF4L1Q9UBU8 362 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 PCYOX1Q9UHG3 505 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 PCDHA3Q9Y5H8 950 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 ALG6Q9Y672 507 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA6L10A6NI86 522 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 HMGB1P1B2RPK0 211 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 ACKR2O00590 384 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 POLR3GO15318 223 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 THAP12O43422 761 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 RAD51CO43502 376 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PSTPIP1O43586 416 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 SPOPO43791 374 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 GRIN3BO60391 1043 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 B4GALT4O60513 344 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PHF2O75151 1096 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PHACTR2O75167 634 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 XYLBO75191 536 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ASS1P00966 412 aaKnown RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 FGGP02679 453 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CYP1A1P04798 512 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 PRKCBP05771 671 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CALB1P05937 261 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 IVLP07476 585 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 GLI1P08151 1106 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 MYBL2P10244 700 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 UNGP13051 313 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 HOXD8P13378 290 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 KRT5P13647 590 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PROZP22891 400 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 MATR3P43243 847 aaKnown RBP eCLIP5.92□□□□□ -1.46
PCF11-205ENST00000530906 GTF2A2P52657 109 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ZNF132P52740 706 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 RWDD2BP57060 319 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 NOP14P78316 857 aaKnown RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 SP4Q02446 784 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 LAMTOR4Q0VGL1 99 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 MOGSQ13724 837 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 DUOXA2Q1HG44 320 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms