RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 PTPN11Q06124 597 aaPredicted RBP22.9■■□□□ 1.26
RDX-211ENST00000530749 AUHQ13825 339 aaKnown RBP22.9■■□□□ 1.26
RDX-211ENST00000530749 IZUMO3Q5VZ72 239 aa22.9■■□□□ 1.26
RDX-211ENST00000530749 GPR142Q7Z601 462 aa22.9■■□□□ 1.26
RDX-211ENST00000530749 RBM41Q96IZ5 413 aaKnown RBP22.9■■□□□ 1.26
RDX-211ENST00000530749 C10orf88Q9H8K7 445 aa22.9■■□□□ 1.26
RDX-211ENST00000530749 CILPO75339 1184 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 YWHAEP62258 255 aaKnown RBP22.89■■□□□ 1.25
RDX-211ENST00000530749 DYNLT1P63172 113 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 GRIK4Q16099 956 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 QPCTQ16769 361 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 P3H1Q32P28 736 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 SYDE1Q6ZW31 735 aaPredicted RBP22.89■■□□□ 1.25
RDX-211ENST00000530749 UBA3Q8TBC4 463 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 HPDLQ96IR7 371 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 TRAIPQ9BWF2 469 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 SYNCQ9H7C4 482 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 ZNF148Q9UQR1 794 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 CITO14578 2027 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 LOC102724159A0A0B4J2E5 919 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 MICAL2O94851 1124 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 KLRC2P26717 231 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 PIGHQ14442 188 aaPredicted RBP22.89■■□□□ 1.25
RDX-211ENST00000530749 TMEM132DQ14C87 1099 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 PWP2Q15269 919 aaKnown RBP22.89■■□□□ 1.25
RDX-211ENST00000530749 SETD4Q9NVD3 440 aa22.89■■□□□ 1.25
RDX-211ENST00000530749 FEZ2Q9UHY8 353 aaPredicted RBP22.89■■□□□ 1.25
RDX-211ENST00000530749 hCG_1818297A0A087WSY0 165 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 M0QYV0 167 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 TRAPPC3O43617 180 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 LRCH4O75427 683 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 FAM49AQ9H0Q0 323 aaPredicted RBP22.88■■□□□ 1.25
RDX-211ENST00000530749 RBM47A0AV96 593 aaKnown RBP22.88■■□□□ 1.25
RDX-211ENST00000530749 FAM107AO95990 144 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 CETPP11597 493 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 CHN1P15882 459 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 CDKN2BP42772 138 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 TNFAIP2Q03169 654 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 TRMT10CQ7L0Y3 403 aaKnown RBP22.88■■□□□ 1.25
RDX-211ENST00000530749 XYLT1Q86Y38 959 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 IFNLR1Q8IU57 520 aaPredicted RBP22.88■■□□□ 1.25
RDX-211ENST00000530749 TMEM176AQ96HP8 235 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 C9orf72Q96LT7 481 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 HOMER3Q9NSC5 361 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 PCSK1NQ9UHG2 260 aa22.88■■□□□ 1.25
RDX-211ENST00000530749 CD48P09326 243 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 SLC25A11Q02978 314 aaKnown RBP22.87■■□□□ 1.25
RDX-211ENST00000530749 POU5F1BQ06416 359 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 TAF5Q15542 800 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 C6orf118Q5T5N4 469 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 MAML3Q96JK9 1138 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 HEXIM2Q96MH2 286 aaKnown RBP22.87■■□□□ 1.25
RDX-211ENST00000530749 LHX5Q9H2C1 402 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 GMNCA6NCL1 334 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 SIGLEC16A6NMB1 481 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 MED7O43513 233 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 TJP3O95049 919 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 MMP3P08254 477 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 CREB1P16220 341 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 RAB6CQ53S08 254 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 HP1BP3Q5SSJ5 553 aaPredicted RBP22.87■■□□□ 1.25
RDX-211ENST00000530749 PRAMEF19Q5SWL8 479 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 CCDC89Q8N998 374 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 NPLOC4Q8TAT6 608 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 LENG1Q96BZ8 264 aaPredicted RBP22.87■■□□□ 1.25
RDX-211ENST00000530749 TMEM121Q9BTD3 319 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 RAB6CQ9H0N0 254 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 NINJ2Q9NZG7 142 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 STRIP2Q9ULQ0 834 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 HES2Q9Y543 173 aa22.87■■□□□ 1.25
RDX-211ENST00000530749 SCN1AP35498 2009 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 TTC4O95801 387 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 PAEPP09466 180 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 CYP3A5P20815 502 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 CETN2P41208 172 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 NDST1P52848 882 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 CORO7P57737 925 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 TFDP3Q5H9I0 405 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 FAM182AQ5T1J6 154 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 LRRC38Q5VT99 294 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 NIPA2Q8N8Q9 360 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 C12orf29Q8N999 325 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 OR6J1Q8NGC5 347 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 PIWIL1Q96J94 861 aaKnown RBP22.86■■□□□ 1.25
RDX-211ENST00000530749 ASB7Q9H672 318 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 CDHR5Q9HBB8 845 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.86■■□□□ 1.25
RDX-211ENST00000530749 C3orf70A6NLC5 250 aaPredicted RBP22.86■■□□□ 1.25
RDX-211ENST00000530749 PPEF2O14830 753 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 MMP13P45452 471 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 SF3A3Q12874 501 aaKnown RBP eCLIP22.86■■□□□ 1.25
RDX-211ENST00000530749 EMID1Q96A84 441 aaPredicted RBP22.86■■□□□ 1.25
RDX-211ENST00000530749 KIF12Q96FN5 646 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 ACAP3Q96P50 834 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 PTPN18Q99952 460 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 FAM129AQ9BZQ8 928 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 DPP3Q9NY33 737 aa22.86■■□□□ 1.25
RDX-211ENST00000530749 ARSEP51690 589 aa22.85■■□□□ 1.25
RDX-211ENST00000530749 PLCB3Q01970 1234 aa22.85■■□□□ 1.25
RDX-211ENST00000530749 TAP1Q03518 808 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms