RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SUMF1Q8NBK3 374 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 BPIFB1Q8TDL5 484 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 NELL1Q92832 810 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 SNX21Q969T3 373 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 THG1LQ9NWX6 298 aaKnown RBP22.46■■□□□ 1.19
SMPD1-204ENST00000530395 GDAP2Q9NXN4 497 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 SNX9Q9Y5X1 595 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 EIF3DO15371 548 aaKnown RBP eCLIP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 PRAMEF12O95522 483 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 TNNC2P02585 160 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 HSP90AA1P07900 732 aaKnown RBP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 DDX6P26196 483 aaKnown RBP eCLIP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 LHX1P48742 406 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 NRLP54845 237 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 RPL10AP62906 217 aaKnown RBP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 INTS6LQ5JSJ4 861 aaKnown RBP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 RALGPS2Q86X27 583 aaPredicted RBP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 HSCBQ8IWL3 235 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 KIAA2013Q8IYS2 634 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 ADGRF2Q8IZF7 708 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 CELF5Q8N6W0 485 aaKnown RBP22.45■■□□□ 1.18
SMPD1-204ENST00000530395 CXorf38Q8TB03 319 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 HPS3Q969F9 1004 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 PI4K2AQ9BTU6 479 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 MAGEF1Q9HAY2 307 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 KIAA1586Q9HCI6 787 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 ABCB6Q9NP58 842 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 TMLHEQ9NVH6 421 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 INTS13Q9NVM9 706 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 NCDNQ9UBB6 729 aa22.45■■□□□ 1.18
SMPD1-204ENST00000530395 MYBPHLA2RUH7 354 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 SPECC1L-ADORA2AF8WAN1 911 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 CSH1P0DML2 217 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 CSH2P0DML3 217 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 CHRNB1P11230 501 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 PCSK1P29120 753 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 AVPR1AP37288 418 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 GLIS3Q8NEA6 775 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 SECISBP2LQ93073 1101 aaKnown RBP22.44■■□□□ 1.18
SMPD1-204ENST00000530395 ZFYVE19Q96K21 471 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 FAM84AQ96KN4 292 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 LRRC3BQ96PB8 259 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 SLC46A2Q9BY10 475 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 HSPBP1Q9NZL4 362 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 SIX4Q9UIU6 781 aa22.44■■□□□ 1.18
SMPD1-204ENST00000530395 UBE4BO95155 1302 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 LILRB5O75023 590 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 ACAT1P24752 427 aaKnown RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 CTHP32929 405 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 SOX9P48436 509 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 NLRP12P59046 1061 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 DUOXA2Q1HG44 320 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 FAM26FQ5R3K3 315 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 FOXD4L5Q5VV16 416 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 LMBRD2Q68DH5 695 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 CNNM4Q6P4Q7 775 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 SHC4Q6S5L8 630 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 CBWD2Q8IUF1 395 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 SPATA2LQ8IUW3 424 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 CMTM8Q8IZV2 173 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 FOXD4L4Q8WXT5 416 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 MRPS31Q92665 395 aaKnown RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 EPC1Q9H2F5 836 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 GTSE1Q9NYZ3 720 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 UXTQ9UBK9 157 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 MAGED2Q9UNF1 606 aaPredicted RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 SMG5Q9UPR3 1016 aaKnown RBP22.43■■□□□ 1.18
SMPD1-204ENST00000530395 GPR179Q6PRD1 2367 aa22.43■■□□□ 1.18
SMPD1-204ENST00000530395 SOBPA7XYQ1 873 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 HMGA1P17096 107 aaKnown RBP22.42■■□□□ 1.18
SMPD1-204ENST00000530395 DGKKQ5KSL6 1271 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 DPH6Q7L8W6 267 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 WDR49Q8IV35 697 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 MAB21L3Q8N8X9 362 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 TTC8Q8TAM2 541 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 HPDLQ96IR7 371 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 C7orf25Q9BPX7 421 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 SMG9Q9H0W8 520 aaKnown RBP22.42■■□□□ 1.18
SMPD1-204ENST00000530395 KIF9Q9HAQ2 790 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 GTF3C4Q9UKN8 822 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 CACNA1AO00555 2505 aa22.42■■□□□ 1.18
SMPD1-204ENST00000530395 PTPRJQ12913 1337 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 DNAH14Q0VDD8 3507 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 F11P03951 625 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 ZSCAN22P10073 491 aaPredicted RBP22.41■■□□□ 1.18
SMPD1-204ENST00000530395 CYP2F1P24903 491 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 CXCL12P48061 93 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 GPR15P49685 360 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 ITPRIPL2Q3MIP1 535 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 CFAP221Q4G0U5 840 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 EPM2AIP1Q7L775 607 aaPredicted RBP22.41■■□□□ 1.18
SMPD1-204ENST00000530395 ERMP1Q7Z2K6 904 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 TMEM150AQ86TG1 271 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 OSTM1Q86WC4 334 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 SPEM1Q8N4L4 309 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 DCLK2Q8N568 766 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 OR5B17Q8NGF7 314 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 ZNF507Q8TCN5 953 aa22.41■■□□□ 1.18
SMPD1-204ENST00000530395 FUBP3Q96I24 572 aaKnown RBP eCLIP22.41■■□□□ 1.18
SMPD1-204ENST00000530395 FAM13BQ9NYF5 915 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms