RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
C9orf135-207ENST00000529446 ABCB6Q9NP58 842 aa12.51□□□□□ -0.41
C9orf135-207ENST00000529446 NLRC4Q9NPP4 1024 aa12.51□□□□□ -0.41
C9orf135-207ENST00000529446 AFF4Q9UHB7 1163 aaKnown RBP12.51□□□□□ -0.41
C9orf135-207ENST00000529446 LUC7L2Q9Y383 392 aaKnown RBP12.51□□□□□ -0.41
C9orf135-207ENST00000529446 ATP8B3O60423 1300 aa12.51□□□□□ -0.41
C9orf135-207ENST00000529446 HIDE1A8MVS5 230 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 NCK2O43639 380 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 ABLIM3O94929 683 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 ADCY5O95622 1261 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 GYPCP04921 128 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 VDRP11473 427 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 FERP16591 822 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 KLRC2P26717 231 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 SOX5P35711 763 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 PTK2Q05397 1052 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 CFAP221Q4G0U5 840 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 ARHGAP17Q68EM7 881 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 RSPO2Q6UXX9 243 aaPredicted RBP12.5□□□□□ -0.41
C9orf135-207ENST00000529446 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 SLC4A11Q8NBS3 891 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 BAP1Q92560 729 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
C9orf135-207ENST00000529446 CEP295NLQ96MC4 621 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 HEXIM2Q96MH2 286 aaKnown RBP12.5□□□□□ -0.41
C9orf135-207ENST00000529446 TWNKQ96RR1 684 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 ELOVL4Q9GZR5 314 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 TLE6Q9H808 572 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 HMGXB4Q9UGU5 601 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 VWA8A3KMH1 1905 aa12.5□□□□□ -0.41
C9orf135-207ENST00000529446 LAMA2P24043 3122 aaKnown RBP12.5□□□□□ -0.41
C9orf135-207ENST00000529446 WDR27A2RRH5 827 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 MYBPHLA2RUH7 354 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 RFXAPO00287 272 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 MED7O43513 233 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 CLASP2O75122 1294 aaKnown RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 GLUD1P00367 558 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 SRGAP2BP0DMP2 458 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 ATF2P15336 505 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 USP8P40818 1118 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 TUFMP49411 452 aaKnown RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 TBX2Q13207 712 aaPredicted RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 ARID5BQ14865 1188 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 DUSP6Q16828 381 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 SLC39A12Q504Y0 691 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 SGO2Q562F6 1265 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 LILRA6Q6PI73 481 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 TMC6Q7Z403 805 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 ZNF677Q86XU0 584 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 CNGA4Q8IV77 575 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 PLEKHA4Q9H4M7 779 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 AJAP1Q9UKB5 411 aaPredicted RBP12.49□□□□□ -0.41
C9orf135-207ENST00000529446 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 PCDHB5Q9Y5E4 795 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 MTCH2Q9Y6C9 303 aa12.49□□□□□ -0.41
C9orf135-207ENST00000529446 MTMR11A4FU01 709 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 LRRC53A6NM62 1247 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 RNF225M0QZC1 329 aaPredicted RBP12.48□□□□□ -0.41
C9orf135-207ENST00000529446 ADAM12O43184 909 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 ATP2C2O75185 946 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 CD19P15391 556 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
C9orf135-207ENST00000529446 GNA15P30679 374 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 CASP14P31944 242 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 ELF1P32519 619 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 MAGEA11P43364 429 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 PDE6CP51160 858 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 CLCN4P51793 760 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 ARPP19P56211 112 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 SLC8A3P57103 927 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 CNGA2Q16280 664 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
C9orf135-207ENST00000529446 MDH1BQ5I0G3 518 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 SFMBT2Q5VUG0 894 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 LRRTM3Q86VH5 581 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 SPATA2LQ8IUW3 424 aaPredicted RBP12.48□□□□□ -0.41
C9orf135-207ENST00000529446 DRC7Q8IY82 874 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 MYLPFQ96A32 169 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 CYFIP2Q96F07 1278 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 TMEM209Q96SK2 561 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 DZANK1Q9NVP4 752 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 FBXW11Q9UKB1 542 aa12.48□□□□□ -0.41
C9orf135-207ENST00000529446 BZW2Q9Y6E2 419 aaKnown RBP12.48□□□□□ -0.41
C9orf135-207ENST00000529446 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
C9orf135-207ENST00000529446 O00370 1275 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms