RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 DRC7Q8IY82 874 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 EFCAB13Q8IY85 973 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 ADSSL1Q8N142 457 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 TMEM130Q8N3G9 435 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 TRIML1Q8N9V2 468 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 C3orf58Q8NDZ4 430 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 BEST2Q8NFU1 509 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 HASPINQ8TF76 798 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 NOC3LQ8WTT2 800 aaKnown RBP6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 CACTINQ8WUQ7 758 aaKnown RBP6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 PPP2R3CQ969Q6 453 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 DHTKD1Q96HY7 919 aaPredicted RBP6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 ARHGAP9Q9BRR9 750 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 CLSTN2Q9H4D0 955 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 TLE6Q9H808 572 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 ENTPD7Q9NQZ7 604 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 DPP3Q9NY33 737 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 STIM2Q9P246 746 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 TUBGCP4Q9UGJ1 667 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 ZNF232Q9UNY5 417 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 SSX2IPQ9Y2D8 614 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 PCDHGC5Q9Y5F6 944 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 NLRC5Q86WI3 1866 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 REV3LO60673 3130 aa6.74□□□□□ -1.33
ATPAF1-209ENST00000529214 SF3B1O75533 1304 aaKnown RBP eCLIP6.74□□□□□ -1.334e-6■■■■■ 120.3
ATPAF1-209ENST00000529214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FAM221BA6H8Z2 402 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 BIN1O00499 593 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PER2O15055 1255 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MAPK13O15264 365 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 NCK2O43639 380 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CSPG5O95196 566 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FGFR3P22607 806 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 NR2F2P24468 414 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CCNE1P24864 410 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MCM4P33991 863 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MAGEA8P43361 318 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 BRCC3P46736 316 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 NRIP1P48552 1158 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CASP4P49662 377 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 GUCY2FP51841 1108 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PMS1P54277 932 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 LILRA4P59901 499 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TFAMQ00059 246 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CYP24A1Q07973 514 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 USP4Q13107 963 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 ADAM15Q13444 863 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 KCNC3Q14003 757 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 RAB33AQ14088 237 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PSMD6Q15008 389 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PTPN14Q15678 1187 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 DUSP6Q16828 381 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FAM171A1Q5VUB5 890 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PLPP4Q5VZY2 271 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 C9orf57Q5W0N0 161 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 RBM23Q86U06 439 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 LNX1Q8TBB1 728 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PARD3BQ8TEW8 1205 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 AUTS2Q8WXX7 1259 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 ZNF516Q92618 1163 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SUSD3Q96L08 255 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CEP63Q96MT8 703 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FNBP1Q96RU3 617 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CDCA3Q99618 268 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 HERC2P3Q9BVR0 1158 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 NUP62CLQ9H1M0 184 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 IGFLR1Q9H665 355 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 RXFP1Q9HBX9 757 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MRPL17Q9NRX2 175 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 INTS13Q9NVM9 706 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 RABL2BQ9UNT1 228 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 KIAA1671Q9BY89 1806 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PRUNE2Q8WUY3 3088 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TDRD15B5MCY1 1934 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 ESYT3A0FGR9 886 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 M0QZQ0 153 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 C2CD2LO14523 706 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PSMA7O14818 248 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PPEF2O14830 753 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 IKBKBO14920 756 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SYN3O14994 580 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CETN3O15182 167 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 AKAP3O75969 853 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TPPPO94811 219 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MBD3O95983 291 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CST3P01034 146 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 URODP06132 367 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CNPP09543 421 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TNNI1P19237 187 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PSMC2P35998 433 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 LTBRP36941 435 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 GNALP38405 381 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MASP1P48740 699 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 GLUD2P49448 558 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 AARSP49588 968 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FKBP3Q00688 224 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms