RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 ZNF197O14709 1029 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 PPEF2O14830 753 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 LRP3O75074 770 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 HIP1RO75146 1068 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 PRAMEF12O95522 483 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 OR4Q2P0C623 313 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 MCF2P10911 925 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 MYL4P12829 197 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 MUTP22033 750 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 ELF1P32519 619 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CXCL12P48061 93 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 NRLP54845 237 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 PEX3P56589 373 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 DAB2P98082 770 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CCINQ13939 588 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 SIM2Q14190 667 aaPredicted RBP6.55□□□□□ -1.36
NUP98-215ENST00000529063 ZNF174Q15697 407 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CSRP2Q16527 193 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 ST3GAL2Q16842 350 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 SLC10A6Q3KNW5 377 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CTXN3Q4LDR2 81 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 ZNF280DQ6N043 979 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 PKN3Q6P5Z2 889 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 MPZL3Q6UWV2 235 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 PRR23BQ6ZRT6 265 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 GAREM2Q75VX8 874 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 KCNK18Q7Z418 384 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 SPEM1Q8N4L4 309 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CELF5Q8N6W0 485 aaKnown RBP6.55□□□□□ -1.36
NUP98-215ENST00000529063 IGSF22Q8N9C0 903 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 ERMNQ8TAM6 284 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 UBXN4Q92575 508 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 KIFAP3Q92845 792 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CHFRQ96EP1 664 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 ZFYVE19Q96K21 471 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 IFT74Q96LB3 600 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 TBC1D32Q96NH3 1257 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 RUSC1Q9BVN2 902 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 CCDC94Q9BW85 323 aaPredicted RBP6.55□□□□□ -1.36
NUP98-215ENST00000529063 ASAH2Q9NR71 780 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 TOPORSQ9NS56 1045 aaPredicted RBP6.55□□□□□ -1.36
NUP98-215ENST00000529063 RXFP3Q9NSD7 469 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 DDX19AQ9NUU7 478 aaKnown RBP6.55□□□□□ -1.36
NUP98-215ENST00000529063 SLC38A7Q9NVC3 462 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 ZNF232Q9UNY5 417 aa6.55□□□□□ -1.36
NUP98-215ENST00000529063 TIMM13Q9Y5L4 95 aaPredicted RBP6.55□□□□□ -1.36
NUP98-215ENST00000529063 MYBPHLA2RUH7 354 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 CCDC169A6NNP5 214 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 SPECC1L-ADORA2AF8WAN1 911 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 TM4SF5O14894 197 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 ZNF263O14978 683 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 CHADO15335 359 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 FAM189A1O60320 539 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 SOAT2O75908 522 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 CXCL8P10145 99 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 HARSP12081 509 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 CPB1P15086 417 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 MZF1P28698 734 aaPredicted RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 PMLP29590 882 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 RPL9P32969 192 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 MCM4P33991 863 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 CCT6AP40227 531 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 AARSP49588 968 aaKnown RBP eCLIP6.54□□□□□ -1.36
NUP98-215ENST00000529063 GUCY2FP51841 1108 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 YARSP54577 528 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 MLLT6P55198 1093 aaPredicted RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 ANAPC15P60006 121 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 DNM1Q05193 864 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 SPAG1Q07617 926 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 ORC2Q13416 577 aaPredicted RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 NOLC1Q14978 699 aaKnown RBP eCLIP6.54□□□□□ -1.36
NUP98-215ENST00000529063 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 SF3A2Q15428 464 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 IL17AQ16552 155 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 TTC38Q5R3I4 469 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 CYP4A22Q5TCH4 519 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 HAUS3Q68CZ6 603 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 HEATR6Q6AI08 1181 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 C1orf186Q6ZWK4 172 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 LONP2Q86WA8 852 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 TTC8Q8TAM2 541 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 RIN3Q8TB24 985 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 ZNF512Q96ME7 567 aaPredicted RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 PGLYRP2Q96PD5 576 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 MMTAG2Q9BU76 263 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 MRPL4Q9BYD3 311 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 GTSE1Q9NYZ3 720 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 RAB23Q9ULC3 237 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 NUB1Q9Y5A7 615 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 CNOT1A5YKK6 2376 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 ATG2BQ96BY7 2078 aa6.54□□□□□ -1.36
NUP98-215ENST00000529063 HELZP42694 1942 aaKnown RBP6.54□□□□□ -1.36
NUP98-215ENST00000529063 ZNF638Q14966 1978 aaKnown RBP6.53□□□□□ -1.36
NUP98-215ENST00000529063 PTPRDP23468 1912 aa6.53□□□□□ -1.36
NUP98-215ENST00000529063 ANAPC1Q9H1A4 1944 aa6.53□□□□□ -1.36
NUP98-215ENST00000529063 TTC26A0AVF1 554 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms