RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 DDX43Q9NXZ2 648 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 NXF1Q9UBU9 619 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 AFF4Q9UHB7 1163 aaKnown RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 L1RE1Q9UN81 338 aa6.62□□□□□ -1.35
MACF1-228ENST00000528611 PRG3Q9Y2Y8 225 aaPredicted RBP6.62□□□□□ -1.35
MACF1-228ENST00000528611 FOXN3O00409 490 aaPredicted RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 PPEF2O14830 753 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 B4GALT3O60512 393 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 MFAP3LO75121 409 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 SERPING1P05155 500 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 ITGB1P05556 798 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 SRGAP2BP0DMP2 458 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PTPN1P18031 435 aaKnown RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 CDH5P33151 784 aaPredicted RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 KRT9P35527 623 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 GATMP50440 423 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PDE6CP51160 858 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 RPL10AP62906 217 aaKnown RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 CCDC173Q0VFZ6 552 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PLD1Q13393 1074 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 GPM6BQ13491 265 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PTPN14Q15678 1187 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PSMD5Q16401 504 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 CTXN3Q4LDR2 81 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 SGO2Q562F6 1265 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 WSCD1Q658N2 575 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 FAM117BQ6P1L5 589 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 TMEM270Q6UE05 265 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 LCLAT1Q6UWP7 414 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 TMEM184AQ6ZMB5 413 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 CCDC149Q6ZUS6 474 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 TMC7Q7Z402 723 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 IRF2BP2Q7Z5L9 587 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 ZDHHC17Q8IUH5 632 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 TCEAL8Q8IYN2 117 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 ANKRD52Q8NB46 1076 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 B3GALNT2Q8NCR0 500 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 MSANTD4Q8NCY6 345 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 WHAMMQ8TF30 809 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 POF1BQ8WVV4 589 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 ZNF606Q8WXB4 792 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 MRPL38Q96DV4 380 aaKnown RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 HSFY1Q96LI6 401 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 KREMEN1Q96MU8 473 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 NOX5Q96PH1 765 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PPP1R9BQ96SB3 815 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PKMYT1Q99640 499 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PI4K2AQ9BTU6 479 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 TRIM62Q9BVG3 475 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 GPR88Q9GZN0 384 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 ELOVL4Q9GZR5 314 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 ZNF576Q9H609 170 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 CSNK1G1Q9HCP0 422 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 LUC7LQ9NQ29 371 aaKnown RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 HESX1Q9UBX0 185 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 LCMT1Q9UIC8 334 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 YBX2Q9Y2T7 364 aaKnown RBP6.61□□□□□ -1.35
MACF1-228ENST00000528611 ASB3Q9Y575 518 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 CEP83Q9Y592 693 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 PCDHGA4Q9Y5G9 962 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 FHOD1Q9Y613 1164 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 NLRC5Q86WI3 1866 aa6.61□□□□□ -1.35
MACF1-228ENST00000528611 LCHNA4D1U4 455 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 C2orf72A6NCS6 295 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 NT5C1B-RDH14C9J2C7 533 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TRIM66O15016 1216 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SART1O43290 800 aaKnown RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 AP5Z1O43299 807 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 HRO43593 1189 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 CXCL14O95715 111 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 FGF19O95750 216 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 HNRNPA1P09651 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
MACF1-228ENST00000528611 WEE2P0C1S8 567 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 CYP11B1P15538 503 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 HOXB8P17481 243 aaPredicted RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 PFKLP17858 780 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 TKTP29401 623 aaKnown RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 GNA15P30679 374 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 CASP14P31944 242 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 CLCN1P35523 988 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SCNN1AP37088 669 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 ACADSBP45954 432 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 BRCC3P46736 316 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 PPP3CCP48454 512 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RPL34P49207 117 aaKnown RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 GUCY2FP51841 1108 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 NDST1P52848 882 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RABGGTBP53611 331 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 BCAT1P54687 386 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RAD23BP54727 409 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 GSCP56915 257 aaPredicted RBP6.6□□□□□ -1.35
MACF1-228ENST00000528611 CDR2Q01850 454 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 HS1BP3Q53T59 392 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 RTP2Q5QGT7 225 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 ZNF697Q5TEC3 545 aa6.6□□□□□ -1.35
MACF1-228ENST00000528611 SPOPLQ6IQ16 392 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms