RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 PLIN2Q99541 437 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 MMTAG2Q9BU76 263 aaKnown RBP12.47□□□□□ -0.41
CMTM1-211ENST00000528484 HAPLN2Q9GZV7 340 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 ASB7Q9H672 318 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 IL21Q9HBE4 155 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 HPS4Q9NQG7 708 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 C2CD2Q9Y426 696 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 ATG2BQ96BY7 2078 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 TCHHQ07283 1943 aa12.47□□□□□ -0.41
CMTM1-211ENST00000528484 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 A0A0B4J269 797 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 PIRO00625 290 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 SLC26A4O43511 780 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 PIGRP01833 764 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 ADRB2P07550 413 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 NFICP08651 508 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 HAPLN1P10915 354 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 UBA7P41226 1012 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 PNPLA4P41247 253 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 TOB1P50616 345 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 DGKEP52429 567 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 NLRP12P59046 1061 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 RPL10AP62906 217 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 ZNF268Q14587 947 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 USP39Q53GS9 565 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 PKN3Q6P5Z2 889 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 GPBP1Q86WP2 473 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 TMEM130Q8N3G9 435 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 TSTD1Q8NFU3 115 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 KCNN1Q92952 543 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 CD101Q93033 1021 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 AK8Q96MA6 479 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 SMOC1Q9H4F8 434 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
CMTM1-211ENST00000528484 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 CPSF3Q9UKF6 684 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 R3HCC1Q9Y3T6 440 aaKnown RBP12.46□□□□□ -0.41
CMTM1-211ENST00000528484 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 NPHP3-ACAD11A0A0J9YXS1 232 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 KHNYNO15037 678 aaKnown RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 TRAK2O60296 914 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 CKMP06732 381 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 USP17L7P0C7H9 530 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 ARSAP15289 507 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 GJA4P35212 333 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 PDE6CP51160 858 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 GALK1P51570 392 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 ZNF252P-AS1Q0IIN9 211 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 DMC1Q14565 340 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 MTF1Q14872 753 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 IL17AQ16552 155 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 WSCD1Q658N2 575 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 ARL6IP4Q66PJ3 421 aaKnown RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 TXNDC8Q6A555 127 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 MON1AQ86VX9 555 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 REEP2Q9BRK0 252 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 DUSP15Q9H1R2 295 aaPredicted RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 TMEM206Q9H813 350 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 TRPC7Q9HCX4 862 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 DPP3Q9NY33 737 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 EBF1Q9UH73 591 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 AGO2Q9UKV8 859 aaKnown RBP12.45□□□□□ -0.42
CMTM1-211ENST00000528484 CCL26Q9Y258 94 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 TSC2P49815 1807 aa12.45□□□□□ -0.42
CMTM1-211ENST00000528484 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
CMTM1-211ENST00000528484 TMEM8BA6NDV4 472 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 C4orf47A7E2U8 309 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 KPNA7A9QM74 516 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 H3BQV1 296 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 FAM189A1O60320 539 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 HUS1O60921 280 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 ALDH1A2O94788 518 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 IL18RAPO95256 599 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 NFATC1O95644 943 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 F11P03951 625 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 ACOT2P49753 483 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 CDR1P51861 262 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 MYL7Q01449 175 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
CMTM1-211ENST00000528484 FOXC1Q12948 553 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 KCNB1Q14721 858 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 LMBRD2Q68DH5 695 aaPredicted RBP12.44□□□□□ -0.42
CMTM1-211ENST00000528484 TCEAL6Q6IPX3 200 aa12.44□□□□□ -0.42
CMTM1-211ENST00000528484 CYP2U1Q7Z449 544 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms