RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	FAM47E	Q6ZV65	393 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	PCYT2	Q99447	389 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	PPME1	Q9Y570	386 aa		24.63	■■□□□ 1.53
GSDMD-208	ENST00000528475	SSC5D	A1L4H1	1573 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	MSC	O60682	206 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	EDF1	O60869	148 aa	Known RBP	24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	MAF	O75444	373 aa	Predicted RBP	24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	PDIA2	Q13087	525 aa	Known RBP	24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	GPATCH11	Q8N954	259 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	TTC13	Q8NBP0	860 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	PAIP2	Q9BPZ3	127 aa	Known RBP	24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	MRPL4	Q9BYD3	311 aa	Known RBP	24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	CEP83	Q9Y592	693 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	SGK1	O00141	431 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	HARS	P12081	509 aa	Known RBP	24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	DNAJC3	Q13217	504 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	TAZ	Q16635	292 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	DUOXA2	Q1HG44	320 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	KIF2B	Q8N4N8	673 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	WRNIP1	Q96S55	665 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	TMEM121	Q9BTD3	319 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	MTMR12	Q9C0I1	747 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	HOXC10	Q9NYD6	342 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	SNCAIP	Q9Y6H5	919 aa		24.62	■■□□□ 1.53
GSDMD-208	ENST00000528475	WFS1	O76024	890 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	PDE4C	Q08493	712 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	SETDB1	Q15047	1291 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	HIF1A	Q16665	826 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	PPIL6	Q8IXY8	311 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	CHST13	Q8NET6	341 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	FNIP1	Q8TF40	1166 aa		24.61	■■□□□ 1.53
GSDMD-208	ENST00000528475	OGT	O15294	1046 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	PHB	P35232	272 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	RPA3	P35244	121 aa	Predicted RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	GEMIN4	P57678	1058 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	GPX6	P59796	221 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	SLC25A11	Q02978	314 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	PARP6	Q2NL67	630 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	DALRD3	Q5D0E6	543 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	SPDYA	Q5MJ70	313 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	TFAP2B	Q92481	460 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	HAUS1	Q96CS2	278 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	STAMBPL1	Q96FJ0	436 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	RAB3IP	Q96QF0	476 aa	Predicted RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	KIF9	Q9HAQ2	790 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	SIGLEC16	A6NMB1	481 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	TTLL13P	A6NNM8	815 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	SPDYE16	A6NNV3	312 aa	Predicted RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	SMAP	O00193	183 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	KRT7	P08729	469 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	POLR2B	P30876	1174 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	CDCA2	Q69YH5	1023 aa	Predicted RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	BBS12	Q6ZW61	710 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	LRRC8C	Q8TDW0	803 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	ACO2	Q99798	780 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	DHRS4	Q9BTZ2	278 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	MYLK2	Q9H1R3	596 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	LHX5	Q9H2C1	402 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	NOP53	Q9NZM5	478 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	RABGEF1	Q9UJ41	708 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	CPSF3	Q9UKF6	684 aa	Known RBP	24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	GRID1	Q9ULK0	1009 aa		24.6	■■□□□ 1.53
GSDMD-208	ENST00000528475	CLUH	O75153	1309 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475		E7ESA3	106 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	DCTN3	O75935	186 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	FARP2	O94887	1054 aa	Predicted RBP	24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	ZWINT	O95229	277 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	UBA1	P22314	1058 aa	Known RBP	24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	CA4	P22748	312 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	ARL4C	P56559	192 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	YWHAE	P62258	255 aa	Known RBP	24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	LACTB	P83111	547 aa	Predicted RBP	24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	PLCB3	Q01970	1234 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	FAM160B1	Q5W0V3	765 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	SAMD7	Q7Z3H4	446 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	ATP11C	Q8NB49	1132 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	N4BP2L2	Q92802	583 aa	Predicted RBP	24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	ACSF2	Q96CM8	615 aa	Predicted RBP	24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	LRMDA	Q9H2I8	198 aa		24.59	■■□□□ 1.53
GSDMD-208	ENST00000528475	ABLIM1	O14639	778 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	TSHR	P16473	764 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	TRPC3	Q13507	836 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	SLC1A5	Q15758	541 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	ACCSL	Q4AC99	568 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	IER5	Q5VY09	327 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	MICALL2	Q8IY33	904 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	THNSL1	Q8IYQ7	743 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	C4orf33	Q8N1A6	199 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	NAT8L	Q8N9F0	302 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	PRPF31	Q8WWY3	499 aa	Known RBP	24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	TRIM33	Q9UPN9	1127 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	CHKB	Q9Y259	395 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	C15orf41	Q9Y2V0	281 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	ANP32D	O95626	131 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	IFNB1	P01574	187 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	PSMA2	P25787	234 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	ALDH3A1	P30838	453 aa		24.58	■■□□□ 1.53
GSDMD-208	ENST00000528475	ASPA	P45381	313 aa		24.58	■■□□□ 1.53

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms