RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 C9orf16Q9BUW7 83 aa3.95□□□□□ -1.78
PTPN22-207ENST00000528414 TPK1Q9H3S4 243 aa3.95□□□□□ -1.78
PTPN22-207ENST00000528414 ATP13A3Q9H7F0 1226 aa3.95□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC177Q9NQR7 707 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-207ENST00000528414 OLA1Q9NTK5 396 aaKnown RBP3.95□□□□□ -1.78
PTPN22-207ENST00000528414 FAM198AQ9UFP1 575 aa3.95□□□□□ -1.78
PTPN22-207ENST00000528414 XDHP47989 1333 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 MAPK8IP3Q9UPT6 1336 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 FAM177BA6PVY3 158 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SFI1A8K8P3 1242 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 GPR25O00155 361 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 IGF2BP3O00425 579 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ATXN7O15265 892 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PDPK1O15530 556 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 URI1O94763 535 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 STARD3NLO95772 234 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ENO2P09104 434 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 HOXC6P09630 235 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PF4V1P10720 104 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CPA1P15085 419 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 TIMP2P16035 220 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SFPQP23246 707 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CCR1P32246 355 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 MLH1P40692 756 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PSMC4P43686 418 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 DHPSP49366 369 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CLCN6P51797 869 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 DSC2Q02487 901 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CTDSPL2Q05D32 466 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SMARCB1Q12824 385 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 GRSF1Q12849 480 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 BMPR2Q13873 1038 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 HNRNPDQ14103 355 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 TLR1Q15399 786 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CDONQ4KMG0 1287 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 FAM47CQ5HY64 1035 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SIGIRRQ6IA17 410 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 FDX2Q6P4F2 183 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 KLC3Q6P597 504 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CWC27Q6UX04 472 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 DPP9Q86TI2 863 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CARFQ8N187 725 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PDCD7Q8N8D1 485 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PCYOX1LQ8NBM8 494 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 LINS1Q8NG48 757 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SPPL3Q8TCT6 385 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ZKSCAN4Q969J2 545 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SPDL1Q96EA4 605 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 TARS2Q9BW92 718 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ZNF341Q9BYN7 854 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SLC39A1Q9NY26 324 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 EMC3Q9P0I2 261 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 RABGEF1Q9UJ41 708 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 MYO6Q9UM54 1294 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ATP6V1DQ9Y5K8 247 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PHLPP2Q6ZVD8 1323 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 GOLGA6L10A6NI86 522 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 M0R2N6 131 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 RRP8O43159 456 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SPOPO43791 374 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ZC3H11AO75152 810 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PGM3O95394 542 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ECDO95905 644 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 GJB1P08034 283 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SNRNP70P08621 437 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 TRHRP34981 398 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 HTR2BP41595 481 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SSTP61278 116 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 NOP14P78316 857 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 KRT85P78386 507 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 IFRD2Q12894 506 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SMAD1Q15797 465 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ALG11Q2TAA5 492 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 HSP90AA5PQ58FG0 334 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SHEQ5VZ18 495 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 FAM171BQ6P995 826 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CYB5D1Q6P9G0 228 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 AAGABQ6PD74 315 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC121Q6ZUS5 278 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ERMP1Q7Z2K6 904 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 TADA2BQ86TJ2 420 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PLEKHM2Q8IWE5 1019 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 NUP93Q8N1F7 819 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 SYNE4Q8N205 404 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 GALNT15Q8N3T1 639 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 DNAJB8Q8NHS0 232 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 EXOC6Q8TAG9 804 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 L3MBTL2Q969R5 705 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 FERMT2Q96AC1 680 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 TUBGCP3Q96CW5 907 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC74BQ96LY2 380 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 ADAD1Q96M93 576 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 OSBPL9Q96SU4 736 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 PKP4Q99569 1192 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 HTATIP2Q9BUP3 242 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 EIF2AQ9BY44 585 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 UNKQ9C0B0 810 aaKnown RBP3.94□□□□□ -1.78
PTPN22-207ENST00000528414 MYLK2Q9H1R3 596 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 BHMT2Q9H2M3 363 aa3.94□□□□□ -1.78
PTPN22-207ENST00000528414 RAD21L1Q9H4I0 556 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms